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WormBase Tree Display for Gene: WBGene00024188

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Name Class

WBGene00024188SMapS_parentSequencecb25.fpc0022b
IdentityVersion2
NameCGC_nameCbr-pax-3From_analysisInferred_from_orthology
Sequence_nameCBG00861
Molecular_nameCBG00861a
CBG00861a.1
CBP38583
CBG00861b
CBP44430
CBG00861b.1
Other_nameCBG_00861Accession_evidenceNDBHE600951
Public_nameCbr-pax-3
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-pax-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpax
Allele (26)
RNASeq_FPKMWBls:00000020.93037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.22951From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.4028From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.04851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.17596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.20273From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.34609From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000313.4122From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
17.4727From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
9.35172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
10.4556From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
12.4267From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000418.6297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
19.1085From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
19.5874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
19.242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
20.5991From_analysisRNASeq.briggsae.WBls:0000004.control_mean
21.3188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
24.2175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.579601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.611151From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.837324From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.32122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.523301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.595376From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.758818From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000352.58744From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.373966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.50169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.53782From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.61389From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.72609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.54955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.426307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.53043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.558572From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.586715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.622737From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.947495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.518659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.614296From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.676172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.181308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.196925From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.350101From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.396704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.975569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.239774From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.282623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.338855From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011.22951From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.92106From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.20273From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.05583From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127531
00127532
Ortholog (35)
Paralog (20)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans pax-3. In C. elegans, pax-3 is involved in epidermal cell fate specification; gonad morphogenesis; and hemidesmosome assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00861a
CBG00861b
Corresponding_CDS_historyCBG00861:bp194
CBG00861:bp216
CBG00861:bp255
Corresponding_transcriptCBG00861a.1
CBG00861b.1
Other_sequence (39)
Experimental_infoExpr_patternExpr1050559
Microarray_resultsGPL8303_CB6_WBGene00024188_A
GPL14143_CBG00861_360-419_0.818_7_C
GPL14143_CBG00861_779-838_0.684_58_B
GPL14143_CBG00861_882-941_0.833_6_A
MethodGene