WormBase Tree Display for Gene: WBGene00024236

WBGene00024236 SMap: S_parent: Sequence: cb25.fpc0022b
  Identity: Version: 2
    Name: CGC_name: Cbr-sec-5 From_analysis: Inferred_from_orthology
      Sequence_name: CBG00928
      Molecular_name: CBG00928
        CBG00928.1
        CBP00233
      Other_name: CBG_00928 Accession_evidence: NDB HE600951
      Public_name: Cbr-sec-5
    DB_info: Database: NDB locus_tag CBG_00928
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:53 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-sec-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sec
    Allele (203)
    RNASeq_FPKM: WBls:0000002 10.2125 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        11.0239 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        11.3445 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        11.5147 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        10.6539 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        10.7785 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        9.54382 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 23.7759 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        25.8078 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        27.8398 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        27.3199 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        30.3439 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 22.7983 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        23.9338 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        25.0693 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        17.2527 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        22.3455 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        22.7419 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        23.8652 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 12.0237 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.03786 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        4.52324 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        6.19493 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.74636 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        6.38857 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        6.96947 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 13.7871 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 10.3649 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        11.8233 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        7.92301 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        8.68559 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        9.52524 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        9.6992 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 10.7923 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        12.4386 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        12.6006 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        12.7813 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        13.124 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        14.0474 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        10.3728 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        12.2134 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        12.472 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        12.5055 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 12.087 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        13.3327 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        13.4158 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        13.6896 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        13.9822 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        13.9873 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        11.0763 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        13.0259 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        13.5112 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 12.0237 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        12.6782 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        12.0554 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        13.4826 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00127573
      00127574
    Ortholog (30)
    Structured_description: Automated_description: Predicted to be involved in Golgi to plasma membrane transport. Predicted to be part of exocyst. Is an ortholog of C. elegans sec-5. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG00928
    Corresponding_transcript: CBG00928.1
    Other_sequence (29)
  Experimental_info: Expr_pattern: Expr1050001
      Expr1068043
    Microarray_results (11)
  Method: Gene