WormBase Tree Display for Gene: WBGene00024677

WBGene00024677 SMap: S_parent: Sequence: cb25.fpc0023
  Identity: Version: 4
    Name: CGC_name: Cbr-rpac-40 From_analysis: Inferred_from_orthology
      Sequence_name: CBG01436
      Molecular_name: CBG01436
        CBG01436.1
        CBP14153
      Other_name: CBG_01436 Accession_evidence: NDB HE601256
      Public_name: Cbr-rpac-40
    DB_info: Database: NDB locus_tag CBG_01436
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:54 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 24 Jul 2008 11:56:41 WBPerson1847 Event: Acquires_merge: WBGene00024678
        3 28 Sep 2012 14:32:03 WBPerson2970 Name_change: CGC_name: Cbr-rpac-40
        4 12 Jun 2018 17:28:56 WBPerson4025 Event: Split_into: WBGene00303283
      Acquires_merge: WBGene00024678
      Split_into: WBGene00303283
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpac
    RNASeq_FPKM: WBls:0000002 24.5633 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        25.0258 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        25.0326 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        25.5086 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        15.9213 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        22.7547 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        24.7945 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 12.4551 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        19.0975 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        25.7399 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        14.0772 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        17.4241 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 36.9159 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        37.2311 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        37.5463 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        32.2862 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        38.0371 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        38.262 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        45.175 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 14.7645 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        16.3546 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        21.1241 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        6.81492 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        18.7393 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        19.0286 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        31.8207 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 22.1485 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 20.2015 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        25.145 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        26.1087 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        27.1031 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        29.0611 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        30.027 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 14.1858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        20.0595 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        21.2142 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        21.6849 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        22.1555 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        22.6823 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        19.0913 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        21.0363 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        26.8886 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        28.52 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        34.1209 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        35.4706 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        35.9232 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        37.0853 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        30.0757 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        35.6969 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        37.8543 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 24.3949 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        25.0258 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        25.3268 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        25.4955 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00128020
      00128021
      00128022
      00128023
      00128024
    Ortholog (33)
    Paralog: WBGene00033312 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00050908 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA polymerase I activity; RNA polymerase III activity; and protein dimerization activity. Predicted to be involved in DNA-templated transcription. Is an ortholog of C. elegans rpac-40. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG01436
    Corresponding_CDS_history: CBG01436:bp194
      CBG01436:bp266
    Corresponding_transcript: CBG01436.1
    Other_sequence (58)
  Experimental_info: Expr_pattern: Expr1058355
    Microarray_results: GPL8303_CB6_WBGene00024677_A
      GPL8303_CB6_WBGene00024677_B
      GPL14143_CBG01436_1686-1745_0.827_41_C
      GPL14143_CBG01436_1813-1872_0.858_28_B
      GPL14143_CBG01436_2048-2107_0.976_1_A
  Method: Gene