WormBase Tree Display for Gene: WBGene00024753

WBGene00024753 SMap: S_parent: Sequence: cb25.fpc0024
  Identity: Version: 2
    Name: CGC_name: Cbr-cln-3.3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG01528
      Molecular_name: CBG01528
        CBG01528.1
        CBP35559
      Other_name: CBG_01528 Accession_evidence: NDB HE601420
      Public_name: Cbr-cln-3.3
    DB_info: Database: NDB locus_tag CBG_01528
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:54 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-cln-3.3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cln
    RNASeq_FPKM: WBls:0000002 4.31578 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        5.32252 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        5.83069 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        7.85378 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        11.693 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        6.58815 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        7.29627 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.17017 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.340339 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.275337 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.485673 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 1.38892 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        1.79743 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        2.20593 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.731496 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.754084 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        1.37355 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        1.78733 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.504092 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.743605 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        1.57621 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.48093 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.878497 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        1.01339 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        1.4355 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 2.89705 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 11.8713 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        2.43928 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        35.7834 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        3.77908 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        4.63118 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        5.48328 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 2.24569 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        2.76043 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        2.93975 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.03774 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.31506 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        3.43783 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        2.04862 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        2.8137 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.91749 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.07455 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 11.7224 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        7.80105 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        8.86441 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        9.05334 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        9.3651 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        4.57896 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        7.26404 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        8.95887 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 3.43783 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.65469 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        2.9858 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.00403 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00128130
    Ortholog (30)
    Paralog: WBGene00041560 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00033735 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00303153 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans cln-3.3. In C. elegans, cln-3.3 is involved in determination of adult lifespan and regulation of egg-laying behavior. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG01528
    Corresponding_CDS_history: CBG01528:bp194
    Corresponding_transcript: CBG01528.1
    Other_sequence (26)
  Experimental_info: Expr_pattern: Expr1063715
    Microarray_results: GPL8303_CB6_WBGene00024753_A
      GPL8303_CB6_WBGene00024753_B
      GPL14143_CBG01528_659-718_0.660_127_C
      GPL14143_CBG01528_797-856_0.938_1_A
      GPL14143_CBG01528_865-924_0.938_2_B
  Method: Gene