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WormBase Tree Display for Gene: WBGene00025041

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Name Class

WBGene00025041SMapS_parentSequencecb25.fpc0045
IdentityVersion2
NameCGC_nameCbr-tps-1From_analysisInferred_from_orthology
Sequence_nameCBG01861
Molecular_nameCBG01861a
CBG01861a.1
CBP40035
CBG01861b
CBP41457
CBG01861b.1
Other_nameCBG_01861Accession_evidenceNDBHE601451
Public_nameCbr-tps-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tps-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtps
AlleleWBVar00021684
WBVar00021689
RNASeq_FPKMWBls:000000219.0501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
19.3007From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
21.4047From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.8633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.7945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
19.1754From_analysisRNASeq.briggsae.WBls:0000002.control_median
19.7521From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000033.64106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.31926From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.99746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
4.3446From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.39528From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000047.31422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
7.50191From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.6896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
7.51481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.83671From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.32799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
8.33693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002719.176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.18033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
7.56603From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.64079From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.371From_analysisRNASeq.briggsae.WBls:0000027.control_median
13.5205From_analysisRNASeq.briggsae.WBls:0000027.control_mean
25.1597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003525.7974From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.6557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
19.1743From_analysisRNASeq.briggsae.WBls:0000038.control_mean
21.0081From_analysisRNASeq.briggsae.WBls:0000038.control_median
26.3605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
29.243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.43797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004115.8574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
19.0738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
19.1236From_analysisRNASeq.briggsae.WBls:0000041.control_mean
19.6728From_analysisRNASeq.briggsae.WBls:0000041.control_median
20.2717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
21.2915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
20.7816From_analysisRNASeq.briggsae.WBls:0000041.control_median
21.5613From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.9965From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
29.8769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
10.8969From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
10.9578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
10.9602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
8.71378From_analysisRNASeq.briggsae.WBls:0000063.control_mean
10.0631From_analysisRNASeq.briggsae.WBls:0000063.control_mean
10.9274From_analysisRNASeq.briggsae.WBls:0000063.control_median
16.8096From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010114.2824From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.6557From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.5369From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.2251From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00128450
00128451
Ortholog (30)
ParalogWBGene00032260Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable catalytic activity. Predicted to be involved in trehalose biosynthetic process. Is an ortholog of C. elegans tps-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01861a
CBG01861b
Corresponding_CDS_historyCBG01861:bp194
CBG01861:bp255
Corresponding_transcriptCBG01861a.1
CBG01861b.1
Other_sequence (44)
Experimental_infoExpr_patternExpr1055374
Microarray_resultsGPL8303_CB6_WBGene00025041_A
GPL8303_CB6_WBGene00025041_B
GPL14143_CBG01861_2415-2474_0.802_14_C
GPL14143_CBG01861_2418-2477_0.792_31_B
GPL14143_CBG01861_3085-3144_0.651_413_A
MethodGene