WormBase Tree Display for Gene: WBGene00025372

WBGene00025372 SMap: S_parent: Sequence: cb25.fpc0058
  Identity: Version: 2
    Name: CGC_name: Cbr-vps-24 From_analysis: Inferred_from_orthology
      Sequence_name: CBG02295
      Molecular_name: CBG02295
        CBG02295.1
        CBP00737
      Other_name: CBG_02295 Accession_evidence: NDB HE601438
      Public_name: Cbr-vps-24
    DB_info: Database: NDB locus_tag CBG_02295
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:55 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 08 Aug 2013 16:53:10 WBPerson2970 Name_change: CGC_name: Cbr-vps-24
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    RNASeq_FPKM: WBls:0000002 101.062 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        104.979 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        68.0191 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        91.3534 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        103.021 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        106.895 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        95.2388 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 125.032 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        152.153 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        97.9102 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        112.339 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        86.9527 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 48.7897 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        52.5942 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        56.3986 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        51.5613 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        57.3846 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        57.9631 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        72.2102 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 28.6877 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.02443 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        75.0875 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        7.95125 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        39.568 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        40.0801 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        72.209 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 50.7608 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 107.182 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        10.7744 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        68.1628 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        76.0654 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        77.3475 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        78.6296 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 100.979 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        101.001 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        103.29 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        105.579 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        105.623 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        91.7137 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        105.601 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        109.002 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        115.241 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        134.852 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 104.807 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        39.1405 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        39.431 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        49.6328 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        52.9447 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        57.1912 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        51.2887 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        58.4325 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        64.6393 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 70.1683 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        75.0875 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        73.6159 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        73.6488 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00128740
    Ortholog (29)
    Paralog: WBGene00026737 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029800 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039382 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in vacuolar transport. Is an ortholog of C. elegans vps-24. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG02295
    Corresponding_CDS_history: CBG02295:bp194
      CBG02295:bp255
    Corresponding_transcript: CBG02295.1
    Other_sequence (47)
  Experimental_info: Expr_pattern: Expr1062736
    Microarray_results: GPL8303_CB6_WBGene00025372_A
      GPL8303_CB6_WBGene00025372_B
      GPL14143_CBG02295_51-110_0.858_13_C
      GPL14143_CBG02295_245-304_0.871_6_B
      GPL14143_CBG02295_391-450_0.909_1_A
  Method: Gene