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WormBase Tree Display for Gene: WBGene00025514

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Name Class

WBGene00025514SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-fut-3From_analysisInferred_from_orthology
Sequence_nameCBG02466
Molecular_nameCBG02466
CBG02466.1
CBP00626
Other_nameCBG_02466Accession_evidenceNDBHE601438
Public_nameCbr-fut-3
DB_infoDatabaseNDBlocus_tagCBG_02466
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-fut-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfut
RNASeq_FPKMWBls:000000216.8472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
22.5724From_analysisRNASeq.briggsae.WBls:0000002.control_mean
24.5088From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
26.3612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
21.8445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
22.3904From_analysisRNASeq.briggsae.WBls:0000002.control_mean
23.1766From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000352.5278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
53.2071From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
53.8865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
57.6496From_analysisRNASeq.briggsae.WBls:0000003.control_mean
66.5346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000430.165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
30.4167From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
30.6683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
28.1059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
30.2224From_analysisRNASeq.briggsae.WBls:0000004.control_mean
30.6277From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
31.5453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.289937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.17935From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.82013From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.9911From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.19507From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.91779From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.21079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.64313From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.9362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.14613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.35544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.74725From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.13906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.14421From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004132.2448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
49.5892From_analysisRNASeq.briggsae.WBls:0000041.control_mean
54.8885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
54.9688From_analysisRNASeq.briggsae.WBls:0000041.control_median
55.049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
56.1745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
41.7691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
48.5988From_analysisRNASeq.briggsae.WBls:0000041.control_mean
51.4666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
53.1776From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006313.7175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
14.7565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
14.8647From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.0558From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
16.5861From_analysisRNASeq.briggsae.WBls:0000063.control_mean
24.5359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.9602From_analysisRNASeq.briggsae.WBls:0000063.control_median
17.3941From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.4344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010114.8647From_analysisRNASeq.briggsae.total_over_all_stages.control_median
20.7002From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
19.1853From_analysisRNASeq.briggsae.total_over_all_stages.control_median
23.6275From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00128915
00128916
00128917
Ortholog (32)
ParalogWBGene00026070Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034069Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034199Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034200Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038777Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039569Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable fucosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Is an ortholog of C. elegans fut-3. In C. elegans, fut-3 is involved in fucosylation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02466
Corresponding_CDS_historyCBG02466:bp194
Corresponding_transcriptCBG02466.1
Other_sequenceCR01550
ES741598.1
CBC01281_1
CBC01468_1
CBC15870_1
CRC01167_1
Dviv_contig09685
HBC19722_1
Experimental_infoExpr_patternExpr1069219
Microarray_resultsGPL8303_CB6_WBGene00025514_A
GPL8303_CB6_WBGene00025514_B
GPL14143_CBG02466_144-203_0.792_18_C
GPL14143_CBG02466_150-209_0.739_45_A
GPL14143_CBG02466_379-438_0.759_34_B
MethodGene