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WormBase Tree Display for Gene: WBGene00025607

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Name Class

WBGene00025607SMapS_parentSequencecb25.fpc0058
IdentityVersion3
NameCGC_nameCbr-abts-3From_analysisInferred_from_orthology
Sequence_nameCBG02581
Molecular_name (12)
Other_nameCBG_02581Accession_evidenceNDBHE601438
CBG_02579
Public_nameCbr-abts-3
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-abts-3
318 Jul 2018 16:44:02WBPerson4025EventAcquires_mergeWBGene00025606
Acquires_mergeWBGene00025606
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classabts
Allele (28)
RNASeq_FPKMWBls:000000213.3088From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
13.4175From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.3372From_analysisRNASeq.briggsae.WBls:0000002.control_mean
19.2853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.9858From_analysisRNASeq.briggsae.WBls:0000002.control_mean
13.3631From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.93173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.203019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.82921From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.4554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.06999From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.55155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000044.66667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.51674From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.3668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.81136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.97841From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.12547From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.92176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.1716From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.37931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
24.6858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.44974From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
15.4035From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.5678From_analysisRNASeq.briggsae.WBls:0000027.control_median
28.0992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003519.0486From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.8899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
11.5282From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.1665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
12.9011From_analysisRNASeq.briggsae.WBls:0000038.control_mean
25.8624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.68563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004115.1055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.7993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.43073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.64455From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.85836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.29847From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.324From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
15.1273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.59118From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.60753From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000633.59352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.80067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.39766From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.44686From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.08381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.35864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.50324From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.59139From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.78513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010112.223From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.3668From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.5828From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.24614From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00129013
00129014
00129015
Contained_in_operonCBOPA0135
Ortholog (36)
ParalogWBGene00036965Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00026827Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032139Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable solute:inorganic anion antiporter activity. Predicted to be involved in monoatomic anion transport. Predicted to be located in membrane. Is an ortholog of C. elegans abts-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02581a
CBG02581b
CBG02581c
CBG02581d
Corresponding_CDS_historyCBG02581:bp194
CBG02581:bp255
Corresponding_transcriptCBG02581a.1
CBG02581b.1
CBG02581c.1
CBG02581d.1
Other_sequence (46)
Experimental_infoExpr_patternExpr1068853
Expr1069421
Microarray_resultsGPL8303_CB6_WBGene00025606_A
GPL8303_CB6_WBGene00025607_A
GPL8303_CB6_WBGene00025607_B
GPL14143_CBG02579_34-93_0.912_1_A
GPL14143_CBG02581_1215-1274_0.790_27_C
GPL14143_CBG02581_1388-1447_0.798_14_B
GPL14143_CBG02581_1477-1536_0.790_26_A
MethodGene