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WormBase Tree Display for Gene: WBGene00026039

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Name Class

WBGene00026039SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-eif-2AFrom_analysisInferred_from_orthology
Sequence_nameCBG03108
Molecular_nameCBG03108a
CBG03108a.1
CBP30539
CBG03108b
CBP44050
CBG03108b.1
Other_nameCBG_03108Accession_evidenceNDBHE601438
Public_nameCbr-eif-2A
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
209 Jan 2017 14:28:09WBPerson2970Name_changeCGC_nameCbr-eif-2A
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classeif
RNASeq_FPKMWBls:000000264.3894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
77.7109From_analysisRNASeq.briggsae.WBls:0000002.control_mean
80.06From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
88.6834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
81.0875From_analysisRNASeq.briggsae.WBls:0000002.control_mean
84.3717From_analysisRNASeq.briggsae.WBls:0000002.control_median
91.2173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003123.205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
131.219From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
139.232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
138.686From_analysisRNASeq.briggsae.WBls:0000003.control_mean
153.622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000465.0557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
65.3107From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
65.5657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
63.9827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
69.6523From_analysisRNASeq.briggsae.WBls:0000004.control_mean
71.6609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
81.9963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002716.4979From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
27.0162From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.73763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
58.8132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
25.8232From_analysisRNASeq.briggsae.WBls:0000027.control_median
29.0493From_analysisRNASeq.briggsae.WBls:0000027.control_mean
35.1484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003553.7392From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003833.4677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
47.934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
52.1878From_analysisRNASeq.briggsae.WBls:0000038.control_mean
52.4221From_analysisRNASeq.briggsae.WBls:0000038.control_median
56.9102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
70.4391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041137.798From_analysisRNASeq.briggsae.WBls:0000041.control_mean
148.145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
149.745From_analysisRNASeq.briggsae.WBls:0000041.control_median
151.345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
154.983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
96.7203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
113.2From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
121.847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
131.04From_analysisRNASeq.briggsae.WBls:0000041.control_mean
134.996From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063109.342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
113.088From_analysisRNASeq.briggsae.WBls:0000063.control_mean
159.835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
96.7357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
99.5938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
99.9342From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
109.783From_analysisRNASeq.briggsae.WBls:0000063.control_mean
93.2596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
99.764From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010170.4391From_analysisRNASeq.briggsae.total_over_all_stages.control_median
79.9531From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
81.0282From_analysisRNASeq.briggsae.total_over_all_stages.control_median
82.752From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129480
00129481
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to enable translation initiation factor activity. Predicted to be involved in translational initiation. Is an ortholog of C. elegans eif-2A. In C. elegans, eif-2A is involved in positive regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03108a
CBG03108b
Corresponding_CDS_historyCBG03108:bp194
Corresponding_transcriptCBG03108a.1
CBG03108b.1
Other_sequence (62)
Experimental_infoExpr_patternExpr1061269
Microarray_resultsGPL8303_CB6_WBGene00026039_A
GPL8303_CB6_WBGene00026039_B
GPL8303_CB6_WBGene00026039_C
GPL14143_CBG03108_1100-1159_0.594_187_C
GPL14143_CBG03108_1276-1335_0.801_1_B
GPL14143_CBG03108_1327-1386_0.650_130_A
MethodGene