WormBase Tree Display for Gene: WBGene00026087

WBGene00026087 SMap: S_parent: Sequence: cb25.fpc0058
  Identity: Version: 2
    Name: CGC_name: Cbr-sgn-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03169
      Molecular_name: CBG03169
        CBG03169.1
        CBP00702
      Other_name: CBG_03169 Accession_evidence: NDB HE601438
      Public_name: Cbr-sgn-1
    DB_info: Database: NDB locus_tag CBG_03169
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:55 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-sgn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sgn
    RNASeq_FPKM: WBls:0000002 15.151 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        16.1182 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        20.4791 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        8.85557 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        12.4869 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        12.7323 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        5.47641 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 3.54985 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        4.00183 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        4.45382 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        3.39973 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        3.80113 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 41.3222 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        41.5317 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        41.7411 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        34.9265 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        37.2386 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        38.9032 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        39.2874 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 10.4273 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.37348 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        25.7643 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4.14411 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        13.3526 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        13.4607 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        22.5611 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 11.7457 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 10.011 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        12.7293 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        14.0164 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        3.6288 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        7.29262 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        9.41678 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 11.8592 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        1.91137 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        2.64199 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        2.91742 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.19286 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        4.90135 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        12.6776 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        16.8318 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        7.52603 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        8.1858 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 2.03615 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        3.63001 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        4.63621 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        4.97744 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        5.24265 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        7.29482 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        4.84871 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        5.11004 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        5.91119 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 11.9957 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        7.29482 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        10.3006 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        13.847 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00129547
      00129548
    Contained_in_operon: CBOPA0589
    Ortholog (32)
    Structured_description: Automated_description: Predicted to be located in membrane. Predicted to be part of sarcoglycan complex. Is an ortholog of C. elegans sgn-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG03169
    Corresponding_CDS_history: CBG03169:bp194
    Corresponding_transcript: CBG03169.1
    Other_sequence (29)
  Experimental_info: Expr_pattern: Expr1053895
    Microarray_results: GPL8303_CB6_WBGene00026087_A
      GPL8303_CB6_WBGene00026087_B
      GPL14143_CBG03169_457-516_0.848_1_B
      GPL14143_CBG03169_535-594_0.830_3_C
      GPL14143_CBG03169_671-730_0.598_116_A
  Method: Gene