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WormBase Tree Display for Gene: WBGene00026242

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Name Class

WBGene00026242SMapS_parentSequencecb25.fpc0063
IdentityVersion2
NameCGC_nameCbr-mca-3From_analysisInferred_from_orthology
Sequence_nameCBG03371
Molecular_nameCBG03371a
CBG03371a.1
CBP00914
CBG03371b
CBP49668
CBG03371c
CBP49553
CBG03371b.1
CBG03371c.1
Other_nameCBG_03371Accession_evidenceNDBHE601244
Public_nameCbr-mca-3
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:51WBPerson2970Name_changeCGC_nameCbr-mca-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmca
RNASeq_FPKMWBls:000000274.014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
79.7996From_analysisRNASeq.briggsae.WBls:0000002.control_mean
79.9237From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
85.461From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
66.3122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
76.4277From_analysisRNASeq.briggsae.WBls:0000002.control_mean
76.9688From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003114.168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
77.1211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
95.6445From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
103.505From_analysisRNASeq.briggsae.WBls:0000003.control_mean
119.226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004120.415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
125.261From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
130.107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
119.856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
122.644From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
123.585From_analysisRNASeq.briggsae.WBls:0000004.control_mean
124.904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027129.023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
13.1898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
38.1174From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
60.1101From_analysisRNASeq.briggsae.WBls:0000027.control_mean
127.981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
77.0778From_analysisRNASeq.briggsae.WBls:0000027.control_mean
83.0492From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035120.518From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038102.81From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
103.078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
43.0277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
85.8583From_analysisRNASeq.briggsae.WBls:0000038.control_mean
94.5175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
98.6637From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004182.1475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
88.0692From_analysisRNASeq.briggsae.WBls:0000041.control_mean
88.3113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
89.146From_analysisRNASeq.briggsae.WBls:0000041.control_median
89.9807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
91.8374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
62.9131From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
83.9119From_analysisRNASeq.briggsae.WBls:0000041.control_mean
88.2817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
88.2965From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063107.381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
90.1328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
92.8968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
96.1549From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
97.2141From_analysisRNASeq.briggsae.WBls:0000063.control_mean
99.5051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
57.1898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
90.5434From_analysisRNASeq.briggsae.WBls:0000063.control_mean
94.5258From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010189.4752From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
92.8968From_analysisRNASeq.briggsae.total_over_all_stages.control_median
91.6865From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
93.7072From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00129700
00129701
00129702
00129703
00129704
00129705
00129706
Contained_in_operonCBOPA0129
Ortholog (35)
Paralog (14)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; ATP hydrolysis activity; and P-type calcium transporter activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans mca-3. In C. elegans, mca-3 is involved in several processes, including negative regulation of cytosolic calcium ion concentration; nematode larval development; and positive regulation of growth rate.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03371a
CBG03371b
CBG03371c
Corresponding_transcriptCBG03371a.1
CBG03371b.1
CBG03371c.1
Other_sequence (81)
Experimental_infoExpr_patternExpr1065667
Microarray_resultsGPL8303_CB6_WBGene00026242_A
GPL14143_CBG03371_2016-2075_0.852_33_C
GPL14143_CBG03371_2138-2197_0.843_40_B
GPL14143_CBG03371_2386-2445_0.866_21_A
MethodGene