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WormBase Tree Display for Gene: WBGene00026258

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Name Class

WBGene00026258SMapS_parentSequencecb25.fpc0063
IdentityVersion2
NameCGC_nameCbr-ech-9From_analysisInferred_from_orthology
Sequence_nameCBG03388
Molecular_nameCBG03388
CBG03388.1
CBP14700
Other_nameCBG_03388Accession_evidenceNDBHE601244
Public_nameCbr-ech-9
DB_infoDatabaseNDBlocus_tagCBG_03388
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ech-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classech
RNASeq_FPKMWBls:00000025.73624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.10358From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.7919From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.53589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
10.6918From_analysisRNASeq.briggsae.WBls:0000002.control_mean
22.3915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.31974From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.106254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.134014From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.161773From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.089342From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.128745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.217745From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.306746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.148549From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.158747From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.209693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.209658From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.476829From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.22083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.434685From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.52255From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.659712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.399082From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.599587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
19.5346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.2751From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.95062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.5212From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004111.8022From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.54014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
35.4962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.61165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.08625From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.56084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.2704From_analysisRNASeq.briggsae.WBls:0000041.control_mean
44.6588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.15769From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.75454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.108025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.268858From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.28655From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.396667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.553049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.341608From_analysisRNASeq.briggsae.WBls:0000063.control_median
10.0121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.89273From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.599587From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.47119From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.62965From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.14472From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129725
00129726
00129727
00129728
Ortholog (25)
ParalogWBGene00026257Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00026856Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028824Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031573Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033493Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036175Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable NAD+ binding activity and oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to be involved in fatty acid metabolic process. Is an ortholog of C. elegans ech-9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03388
Corresponding_CDS_historyCBG03388:bp194
CBG03388:bp255
Corresponding_transcriptCBG03388.1
Other_sequenceCRC08797_1
CR12067
Experimental_infoExpr_patternExpr1061571
Microarray_resultsGPL8303_CB6_WBGene00026258_A
GPL8303_CB6_WBGene00026258_B
GPL14143_CBG03388_581-640_0.877_17_C
GPL14143_CBG03388_635-694_0.885_16_B
GPL14143_CBG03388_1094-1153_0.946_4_A
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
WBPaper00058955:heatshock_upregulated_CBG
MethodGene