WormBase Tree Display for Gene: WBGene00026287

WBGene00026287 SMap: S_parent: Sequence: cb25.fpc0063
  Identity: Version: 2
    Name: CGC_name: Cbr-ttr-39 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03419
      Molecular_name: CBG03419
        CBG03419.1
        CBP06517
      Other_name: CBG_03419 Accession_evidence: NDB HE601244
      Public_name: Cbr-ttr-39
    DB_info: Database: NDB locus_tag CBG_03419
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:55 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 15 Oct 2007 15:19:45 WBPerson2970 Name_change: CGC_name: Cbr-ttr-39
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele: WBVar00108341
      WBVar00011784
    RNASeq_FPKM: WBls:0000002 2.96194 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        5.12987 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        5.18217 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        7.24551 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        4.91328 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        5.04773 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        5.07573 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.044382 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.088764 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.029588 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.33073 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.66146 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.132292 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (12)
      WBls:0000027 0.194709 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.230077 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        1.96069 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.45727 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.718338 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        1.2066 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        1.77216 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 7.5462 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.78161 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        21.9203 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        7.29255 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        7.95906 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        8.62557 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        9.90501 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 1.83539 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        2.07021 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        2.25076 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.43131 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        2.68554 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        4.40527 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        11.1313 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        3.41829 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        4.49741 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.11097 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.7613 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        2.52831 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        2.5462 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        3.30322 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        5.01612 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        5.66416 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        2.85075 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        3.1553 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        3.27856 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 2.96194 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        4.72402 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        2.75407 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        4.27669 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00129780
    Contained_in_operon: CBOPA0130
    Ortholog (45)
    Paralog (49)
    Structured_description: Automated_description: Predicted to be located in cell surface. Is an ortholog of C. elegans ttr-39. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG03419
    Corresponding_CDS_history: CBG03419:bp194
    Corresponding_transcript: CBG03419.1
    Other_sequence: CJC18189_1
  Experimental_info: Expr_pattern: Expr1059840
    Microarray_results: GPL8303_CB6_WBGene00026287_A
      GPL8303_CB6_WBGene00026287_B
      GPL14143_CBG03419_181-240_0.942_2_B
      GPL14143_CBG03419_297-356_0.712_73_C
      GPL14143_CBG03419_400-459_0.950_1_A
  Method: Gene