WormBase Tree Display for Gene: WBGene00026309

WBGene00026309 SMap: S_parent: Sequence: cb25.fpc0063
  Identity: Version: 2
    Name: CGC_name: Cbr-dhp-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03443
      Molecular_name: CBG03443
        CBG03443.1
        CBP00929
      Other_name: CBG_03443 Accession_evidence: NDB HE601244
      Public_name: Cbr-dhp-2
    DB_info: Database: NDB locus_tag CBG_03443
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:55 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-dhp-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhp
    RNASeq_FPKM: WBls:0000002 11.5401 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        14.1977 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        14.8399 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        5.58275 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.27049 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        8.97271 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        9.89023 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 1.30295 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        4.86469 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        8.42643 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        5.14109 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        5.6939 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 22.5374 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        23.0558 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        23.5743 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        18.7219 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        22.7061 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        22.8276 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        25.8692 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        13.9879 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        17.2289 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        18.3761 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        34.6839 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        6.25576 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        9.59977 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
      WBls:0000027 10.3043 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        23.5399 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.56433 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        4.80863 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        1.04893 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        3.68648 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        7.99045 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 3.74896 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.450152 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        10.1224 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        1.80636 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        22.8068 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        5.96438 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        8.79643 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 0.659458 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.24293 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.2919 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.34086 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        2.09406 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.13298 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        2.95655 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.08472 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        4.57225 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        5.55985 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.671717 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1.7008 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2.29781 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        2.40527 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3.61586 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        3.74017 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.46788 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        2.53937 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        2.78093 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 4.80863 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        8.60783 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        4.97081 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        8.894 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00129820
      00129821
      00129822
    Ortholog (31)
    Paralog: WBGene00035379 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040591 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds. Predicted to be located in cytoplasm. Is an ortholog of C. elegans dhp-2. In C. elegans, dhp-2 is involved in pyrimidine nucleobase catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG03443
    Corresponding_CDS_history: CBG03443:bp194
    Corresponding_transcript: CBG03443.1
    Other_sequence (41)
  Experimental_info: Expr_pattern: Expr1050204
    Microarray_results: GPL8303_CB6_WBGene00026309_A
      GPL8303_CB6_WBGene00026309_C
      GPL8303_CB6_WBGene00026309_D
      GPL8303_CB6_WBGene00026309_E
      GPL14143_CBG03443_1066-1125_0.819_81_C
      GPL14143_CBG03443_1111-1170_0.918_13_B
      GPL14143_CBG03443_1298-1357_0.764_130_A
  Method: Gene