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WormBase Tree Display for Gene: WBGene00026823

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Name Class

WBGene00026823SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-rpl-25.2From_analysisInferred_from_orthology
Sequence_nameCBG04080
Molecular_nameCBG04080
CBG04080.1
CBP06641
Other_nameCBG_04080Accession_evidenceNDBHE600906
Public_nameCbr-rpl-25.2
DB_infoDatabaseNDBlocus_tagCBG_04080
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-rpl-25.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpl
RNASeq_FPKMWBls:00000021453.18From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1549.3From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1786.46From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2356.91From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1953.1From_analysisRNASeq.briggsae.WBls:0000002.control_median
2462.67From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4491.27From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003562.62From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
604.359From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
646.097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
613.055From_analysisRNASeq.briggsae.WBls:0000003.control_mean
630.448From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004740.935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
776.731From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
812.527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
1072.92From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1106.22From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
686.751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
883.871From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:0000027140.683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1421.1From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
529.336From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
697.04From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1148.74From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
809.965From_analysisRNASeq.briggsae.WBls:0000027.control_mean
839.038From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000351462.62From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381228.11From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1360.67From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1726.51From_analysisRNASeq.briggsae.WBls:0000038.control_median
2070.58From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2092.34From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3601.21From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000412005.03From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2370.93From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2418.61From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2425.31From_analysisRNASeq.briggsae.WBls:0000041.control_median
2432.02From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2628.04From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2137.11From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2444.88From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3048.45From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631740.86From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1850.44From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2030.39From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2614.03From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2704.6From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5287.28From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1898.27From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1964.33From_analysisRNASeq.briggsae.WBls:0000063.control_median
2570.21From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011549.3From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1695.45From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1505.96From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1720.74From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00130452
00130453
00130454
Ortholog (17)
ParalogWBGene00034993Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans rpl-25.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04080
Corresponding_CDS_historyCBG04080:bp194
Corresponding_transcriptCBG04080.1
Other_sequence (86)
Experimental_infoExpr_patternExpr1054758
Microarray_resultsGPL8303_CB6_WBGene00026823_A
GPL8303_CB6_WBGene00026823_B
GPL14143_CBG04080_83-142_0.927_3_B
GPL14143_CBG04080_255-314_0.953_2_A
GPL14143_CBG04080_372-431_0.861_22_C
Expression_clusterWBPaper00051425:CB_L4_vs_embryo_downregulated
MethodGene