WormBase Tree Display for Gene: WBGene00027255

WBGene00027255 SMap: S_parent: Sequence: cb25.fpc0090
  Identity: Version: 2
    Name: CGC_name: Cbr-rrbs-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG04617
      Molecular_name: CBG04617
        CBG04617.1
        CBP21483
      Other_name: CBG_04617 Accession_evidence: NDB HE601135
      Public_name: Cbr-rrbs-1
    DB_info: Database: NDB locus_tag CBG_04617
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 08 Jan 2009 14:13:25 WBPerson2970 Name_change: CGC_name: Cbr-rrbs-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rrbs
    RNASeq_FPKM: WBls:0000002 107.578 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        72.8432 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        90.827 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        92.0598 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        53.4705 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        81.4879 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        82.4515 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 162.723 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        195.337 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        227.951 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        127.562 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        172.745 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 109.913 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        119.25 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        128.587 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        114.628 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        123.844 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        129.179 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        136.915 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 11.3401 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        30.8988 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        4.29245 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        77.0639 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        115.182 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        44.202 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        51.9696 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 61.2663 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 102.595 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        109.751 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        116.906 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        157.233 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        22.1381 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        99.718 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 107.835 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        111.256 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        116.102 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        120.947 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        125.864 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        73.2741 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        110.487 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        146.713 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        84.8676 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        65.1796 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        73.2845 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        80.5921 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        83.6525 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        88.3689 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        68.7523 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        82.1223 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        86.6158 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 88.3689 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        89.7533 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        94.0943 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        94.6836 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00130864
      00130865
    Ortholog (33)
    Structured_description: Automated_description: Predicted to be involved in ribosome biogenesis. Predicted to be located in nucleus. Is an ortholog of C. elegans rrbs-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG04617
    Corresponding_CDS_history: CBG04617:bp194
    Corresponding_transcript: CBG04617.1
    Other_sequence (60)
  Experimental_info: Expr_pattern: Expr1058296
    Microarray_results: GPL8303_CB6_WBGene00027255_A
      GPL8303_CB6_WBGene00027255_B
      GPL14143_CBG04617_344-403_0.927_4_C
      GPL14143_CBG04617_617-676_0.912_13_B
      GPL14143_CBG04617_732-791_0.935_1_A
  Method: Gene