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WormBase Tree Display for Gene: WBGene00027728

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Name Class

WBGene00027728SMapS_parentSequencechrX
IdentityVersion1
NameSequence_nameCBG05216
Molecular_nameCBG05216
CBG05216.1
CBP42434
Other_nameCBG_05216Accession_evidenceNDBHE601042
Public_nameCBG05216
DB_infoDatabaseNDBlocus_tagCBG_05216
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.72688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.01023From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.13249From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.66037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.10882From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.15122From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.20741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000035.19976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
6.46205From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.72433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.69201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
5.20537From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000043.88168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
4.76579From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.64989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.82376From_analysisRNASeq.briggsae.WBls:0000004.control_mean
5.97149From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
6.05483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
7.56092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:00000240.273747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
0.326003From_analysisRNASeq.briggsae.WBls:0000024.control_median
0.341783From_analysisRNASeq.briggsae.WBls:0000024.control_mean
0.378258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
0.715129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
0.79325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
0.838323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
1.08799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
1.37284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
WBls:00000270.124878From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.374634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.093658From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.467395From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.293313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.343281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.580438From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.589612From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.817596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.904259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.05341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.11207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.20824From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.30441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.78292From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.66179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.48439From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.66437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.8605From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.36696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.503201From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.592931From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.661586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.26149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.627258From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.689961From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.62376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.715129From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.38167From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.957245From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.82132From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131181
00131182
OrthologCSP26.g15693Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP32.g13461Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP40.g2196Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_X.g25609Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00170.g6197Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01954Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11814Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_X0157510Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00131663Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00058786Caenorhabditis remaneiFrom_analysisWormBase-Compara
ParalogWBGene00027729Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030491Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032954Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035086Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035089Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040794Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040795Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041599Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041617Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable zinc ion binding activity.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05216
Corresponding_CDS_historyCBG05216:bp194
CBG05216:bp255
Corresponding_transcriptCBG05216.1
Experimental_infoExpr_patternExpr1066644
Microarray_resultsGPL8303_CB6_WBGene00027728_A
GPL8303_CB6_WBGene00027728_B
GPL14143_CBG05216_166-225_0.902_1_A
MethodGene