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WormBase Tree Display for Gene: WBGene00027805

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Name Class

WBGene00027805SMapS_parentSequencecb25.fpc0106
IdentityVersion2
NameCGC_nameCbr-cyp-13B2From_analysisInferred_from_orthology
Sequence_nameCBG05342
Molecular_nameCBG05342
CBG05342.1
CBP01345
Other_nameCBG_05342Accession_evidenceNDBHE601042
Public_nameCbr-cyp-13B2
DB_infoDatabaseNDBlocus_tagCBG_05342
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cyp-13B2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcyp
RNASeq_FPKMWBls:000000210.4912From_analysisRNASeq.briggsae.WBls:0000002.control_mean
10.8006From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
11.9169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.75602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
10.0926From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.89675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.84867From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000314.4417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
19.4086From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
24.3756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
12.6653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
17.1609From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000421.6095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
22.9536From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
24.2977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
24.0562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
24.7823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
25.1059From_analysisRNASeq.briggsae.WBls:0000004.control_mean
30.7837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.499012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
21.265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.76549From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.1765From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.8158From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.86611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.8489From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.93788From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.8896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.59374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.16655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
24.5124From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.02808From_analysisRNASeq.briggsae.WBls:0000038.control_median
80.3996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004112.0742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
8.04825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.8633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
9.38713From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.72418From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.91095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
10.9926From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.7761From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.0777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
19.6823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.9936From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.5973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
13.043From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
13.2259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
16.1017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
12.272From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.1344From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.6639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.8006From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.4697From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.0759From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.5814From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131244
00131245
00131246
00131247
Ortholog (31)
ParalogWBGene00024320Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024321Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024322Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024326Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024327Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024351Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024561Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027804Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00270422Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Is an ortholog of C. elegans cyp-13B2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05342
Corresponding_CDS_historyCBG05342:bp194
Corresponding_transcriptCBG05342.1
Other_sequenceES411558.1
FG973512.1
ES743048.1
Tcir_isotig10028
CBC10672_1
Hbac_isotig01229
HBC00096_1
Experimental_infoExpr_patternExpr1062837
Microarray_resultsGPL8303_CB6_WBGene00027805_A
GPL8303_CB6_WBGene00027805_B
GPL14143_CBG05342_342-401_0.751_55_B
GPL14143_CBG05342_1242-1301_0.813_1_A
GPL14143_CBG05342_1391-1450_0.761_44_C
MethodGene