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WormBase Tree Display for Gene: WBGene00027881

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Name Class

WBGene00027881SMapS_parentSequencecb25.fpc0110
IdentityVersion2
NameCGC_nameCbr-pqn-89From_analysisInferred_from_orthology
Sequence_nameCBG05430
Molecular_nameCBG05430
CBG05430.1
CBP26654
Other_nameCBG_05430Accession_evidenceNDBHE601369
Public_nameCbr-pqn-89
DB_infoDatabaseNDBlocus_tagCBG_05430
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-pqn-89
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpqn
AlleleWBVar00110566
RNASeq_FPKMWBls:000000223.2974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
31.7047From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
46.1512From_analysisRNASeq.briggsae.WBls:0000002.control_mean
83.4515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
30.4383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
31.0715From_analysisRNASeq.briggsae.WBls:0000002.control_median
42.223From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.13852From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.27704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
4.3193From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.68086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000425.2127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
28.5789From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
31.9451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
28.2955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
28.5707From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
29.4016From_analysisRNASeq.briggsae.WBls:0000004.control_mean
32.9842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.0519From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.90601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
29.0776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.17195From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
17.1248From_analysisRNASeq.briggsae.WBls:0000027.control_median
24.5502From_analysisRNASeq.briggsae.WBls:0000027.control_mean
62.0451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003535.4664From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003835.6943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
35.9838From_analysisRNASeq.briggsae.WBls:0000038.control_mean
39.4562From_analysisRNASeq.briggsae.WBls:0000038.control_median
43.2182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.72718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
60.2955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004114.4605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
15.9396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
17.5737From_analysisRNASeq.briggsae.WBls:0000041.control_median
19.2077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
23.1658From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.0552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
31.1315From_analysisRNASeq.briggsae.WBls:0000041.control_median
34.4185From_analysisRNASeq.briggsae.WBls:0000041.control_mean
46.7911From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
67.0569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006324.8402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
24.913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
25.128From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
28.9978From_analysisRNASeq.briggsae.WBls:0000063.control_mean
29.162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
40.946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
24.7408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
25.0205From_analysisRNASeq.briggsae.WBls:0000063.control_median
28.2883From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010129.0776From_analysisRNASeq.briggsae.total_over_all_stages.control_median
31.4039From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
29.1198From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.5873From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
ParalogWBGene00032174Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans pqn-89.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05430
Corresponding_CDS_historyCBG05430:bp194
Corresponding_transcriptCBG05430.1
Other_sequenceCBC01697_1
Name_isotig07450
OOC00846_1
Dviv_isotig29472
Hbac_isotig07390
Experimental_infoExpr_patternExpr1057999
Microarray_resultsGPL8303_CB6_WBGene00027881_A
GPL14143_CBG05430_738-797_0.904_27_B
GPL14143_CBG05430_918-977_0.917_18_C
GPL14143_CBG05430_1061-1120_0.892_39_A
MethodGene