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WormBase Tree Display for Gene: WBGene00028053

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Name Class

WBGene00028053SMapS_parentSequencecb25.fpc0129
IdentityVersion2
NameCGC_nameCbr-par-4From_analysisInferred_from_orthology
Sequence_nameCBG05647
Molecular_nameCBG05647
CBG05647.1
CBP15405
Other_nameCBG_05647Accession_evidenceNDBHE601419
Public_nameCbr-par-4
DB_infoDatabaseNDBlocus_tagCBG_05647
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-par-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpar
AlleleWBVar00005732
RNASeq_FPKMWBls:000000225.2415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
26.0573From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.375From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
26.5555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
26.4653From_analysisRNASeq.briggsae.WBls:0000002.control_median
27.8996From_analysisRNASeq.briggsae.WBls:0000002.control_mean
33.4263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000346.745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
49.9605From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
53.176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
47.9267From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
49.2826From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000429.9811From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
31.7475From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
33.5139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
30.2959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
31.5043From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
31.8728From_analysisRNASeq.briggsae.WBls:0000004.control_mean
34.0686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.36761From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
20.5011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.12923From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.99931From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.347From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.3901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.75966From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003515.4236From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.6574From_analysisRNASeq.briggsae.WBls:0000038.control_mean
17.1913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
18.2656From_analysisRNASeq.briggsae.WBls:0000038.control_median
19.3398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
25.1751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.92322From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004138.1944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
49.2209From_analysisRNASeq.briggsae.WBls:0000041.control_mean
50.3979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
52.1808From_analysisRNASeq.briggsae.WBls:0000041.control_median
53.9636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
54.3275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
42.8743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
43.2135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
46.8057From_analysisRNASeq.briggsae.WBls:0000041.control_median
47.1619From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
23.5466From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.3001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
28.7909From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
30.0425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
33.5996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
24.3288From_analysisRNASeq.briggsae.WBls:0000063.control_mean
28.2398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
28.5154From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010125.2415From_analysisRNASeq.briggsae.total_over_all_stages.control_median
25.6332From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
27.3976From_analysisRNASeq.briggsae.total_over_all_stages.control_median
27.6132From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131471
00131472
00131473
Ortholog (32)
Paralog (14)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans par-4. In C. elegans, par-4 is involved in several processes, including asymmetric protein localization involved in cell fate determination; cell division; and determination of adult lifespan.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05647
Corresponding_CDS_historyCBG05647:bp194
CBG05647:bp255
Corresponding_transcriptCBG05647.1
Other_sequenceCGC00224_1
TSC00393_1
BMC07272_1
TS00844
CD374730.1
PPC11836_1
Acan_isotig18274
Tcir_isotig08674
WBC00604_1
Experimental_infoExpr_patternExpr1051048
Microarray_resultsGPL8303_CB6_WBGene00028053_A
GPL8303_CB6_WBGene00028053_B
GPL14143_CBG05647_828-887_0.869_27_C
GPL14143_CBG05647_955-1014_0.886_20_A
GPL14143_CBG05647_986-1045_0.862_34_B
MethodGene