Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00028139

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00028139SMapS_parentSequencecb25.fpc0143a
IdentityVersion2
NameCGC_nameCbr-trxr-1From_analysisInferred_from_orthology
Sequence_nameCBG05747
Molecular_nameCBG05747a
CBG05747a.1
CBP37969
CBG05747b
CBP37979
CBG05747b.1
Other_nameCBG_05747Accession_evidenceNDBHE600909
Public_nameCbr-trxr-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-trxr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtrxr
RNASeq_FPKMWBls:000000287.1829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
89.0258From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
89.2201From_analysisRNASeq.briggsae.WBls:0000002.control_mean
91.4516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
56.7377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
81.0995From_analysisRNASeq.briggsae.WBls:0000002.control_mean
88.1043From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003173.333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
200.848From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
228.362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
193.54From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
198.412From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000479.642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
81.3156From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
82.9891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
74.9227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
75.6352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
81.0821From_analysisRNASeq.briggsae.WBls:0000004.control_mean
92.2214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002718.8967From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
35.0317From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.31736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
79.881From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
49.3889From_analysisRNASeq.briggsae.WBls:0000027.control_median
50.6822From_analysisRNASeq.briggsae.WBls:0000027.control_mean
97.6337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003570.194From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003823.1482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
58.8871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
63.524From_analysisRNASeq.briggsae.WBls:0000038.control_mean
66.0329From_analysisRNASeq.briggsae.WBls:0000038.control_median
73.1786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
98.8822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041122.732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
140.434From_analysisRNASeq.briggsae.WBls:0000041.control_mean
140.89From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
144.212From_analysisRNASeq.briggsae.WBls:0000041.control_median
147.533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
150.581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
134.399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
141.28From_analysisRNASeq.briggsae.WBls:0000041.control_mean
151.546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006336.1054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
42.5233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
42.9058From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
44.7508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
47.4595From_analysisRNASeq.briggsae.WBls:0000063.control_mean
71.0122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
43.8283From_analysisRNASeq.briggsae.WBls:0000063.control_median
52.4914From_analysisRNASeq.briggsae.WBls:0000063.control_mean
77.651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010179.881From_analysisRNASeq.briggsae.total_over_all_stages.control_median
82.8688From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
81.4351From_analysisRNASeq.briggsae.total_over_all_stages.control_median
88.3548From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (32)
ParalogWBGene00024045Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029078Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031296Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032461Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034109Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040306Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans trxr-1. In C. elegans, trxr-1 is involved in ecdysis, collagen and cuticulin-based cuticle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05747a
CBG05747b
Corresponding_CDS_historyCBG05747:bp194
CBG05747:bp239
Corresponding_transcriptCBG05747a.1
CBG05747b.1
Other_sequence (62)
Experimental_infoExpr_patternExpr1063092
Microarray_resultsGPL8303_CB6_WBGene00028139_A
GPL8303_CB6_WBGene00028139_B
GPL14143_CBG05747_1450-1509_0.885_34_B
GPL14143_CBG05747_1649-1708_0.893_25_A
GPL14143_CBG05747_1850-1909_0.959_1_C
MethodGene