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WormBase Tree Display for Gene: WBGene00028143

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Name Class

WBGene00028143SMapS_parentSequencecb25.fpc0143a
IdentityVersion2
NameCGC_nameCbr-tin-9.1From_analysisInferred_from_orthology
Sequence_nameCBG05752
Molecular_nameCBG05752
CBG05752.1
CBP01491
Other_nameCBG_05752Accession_evidenceNDBHE600909
Public_nameCbr-tin-9.1
DB_infoDatabaseNDBlocus_tagCBG_05752
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tin-9.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtin
RNASeq_FPKMWBls:000000234.8383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
38.198From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
41.1633From_analysisRNASeq.briggsae.WBls:0000002.control_mean
50.4537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
116.052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
44.3259From_analysisRNASeq.briggsae.WBls:0000002.control_median
59.8855From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000326.9008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
28.3799From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
29.859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
23.6947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
26.8182From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000429.2119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
32.9088From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
36.6057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
22.1568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
31.7241From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
34.7241From_analysisRNASeq.briggsae.WBls:0000004.control_mean
53.9219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.4779From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
12.7701From_analysisRNASeq.briggsae.WBls:0000027.control_mean
21.3377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.49454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.9078From_analysisRNASeq.briggsae.WBls:0000027.control_median
20.5435From_analysisRNASeq.briggsae.WBls:0000027.control_mean
43.8637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003547.2944From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003836.5744From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
37.3423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
45.5592From_analysisRNASeq.briggsae.WBls:0000038.control_median
45.785From_analysisRNASeq.briggsae.WBls:0000038.control_mean
53.776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
55.4472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004136.9496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
42.7669From_analysisRNASeq.briggsae.WBls:0000041.control_mean
44.0697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
44.0778From_analysisRNASeq.briggsae.WBls:0000041.control_median
44.0858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
45.9625From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
40.0301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
43.9972From_analysisRNASeq.briggsae.WBls:0000041.control_mean
52.8855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006324.7302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.5522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
32.7521From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
32.7875From_analysisRNASeq.briggsae.WBls:0000063.control_mean
32.815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
47.0878From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
32.6979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
32.725From_analysisRNASeq.briggsae.WBls:0000063.control_median
32.7725From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010134.8124From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
36.6057From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.7776From_analysisRNASeq.briggsae.total_over_all_stages.control_median
37.5418From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (24)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Tim10/DDP family zinc finger; Tim10-like domain superfamily; and Tim10-like. Is an ortholog of C. elegans tin-9.1. In C. elegans, tin-9.1 is involved in protein insertion into mitochondrial inner membrane; regulation of growth; and reproduction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05752
Corresponding_CDS_historyCBG05752:bp194
Corresponding_transcriptCBG05752.1
Other_sequence (21)
Experimental_infoExpr_patternExpr1067756
Microarray_resultsGPL8303_CB6_WBGene00028143_A
GPL8303_CB6_WBGene00028143_B
GPL14143_CBG05752_171-230_0.961_3_A
MethodGene