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WormBase Tree Display for Gene: WBGene00028630

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Name Class

WBGene00028630SMapS_parentSequencecb25.fpc0156
IdentityVersion3
NameCGC_nameCbr-icl-1From_analysisInferred_from_orthology
Sequence_nameCBG06335
Molecular_nameCBG06335
CBG06335.1
CBP28453
Other_nameCbr-gei-7From_analysisInferred_from_orthology
CBG_06335Accession_evidenceNDBHE601320
Public_nameCbr-icl-1
DB_infoDatabaseNDBlocus_tagCBG_06335
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-gei-7
316 Nov 2010 16:33:39WBPerson2970Name_changeCGC_nameCbr-icl-1
Other_nameCbr-gei-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classicl
RNASeq_FPKMWBls:0000002304.653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
363.266From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
370.829From_analysisRNASeq.briggsae.WBls:0000002.control_mean
444.567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
297.014From_analysisRNASeq.briggsae.WBls:0000002.control_mean
333.96From_analysisRNASeq.briggsae.WBls:0000002.control_median
75.5696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000388.6594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
92.418From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
96.1766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
89.2423From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
91.3594From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004233.466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
233.655From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
233.844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
214.334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
229.719From_analysisRNASeq.briggsae.WBls:0000004.control_mean
230.968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
235.984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024150.364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
214.237From_analysisRNASeq.briggsae.WBls:0000024.control_mean
221.552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
227.79From_analysisRNASeq.briggsae.WBls:0000024.control_median
234.029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
251.002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
26.6441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
280.34From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
67.273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
18.1662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
374.104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
416.654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
WBls:0000027102.986From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
252.786From_analysisRNASeq.briggsae.WBls:0000027.control_mean
37.6695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
617.704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
333.349From_analysisRNASeq.briggsae.WBls:0000027.control_mean
339.011From_analysisRNASeq.briggsae.WBls:0000027.control_median
575.036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035464.692From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038318.145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
446.301From_analysisRNASeq.briggsae.WBls:0000038.control_mean
472.457From_analysisRNASeq.briggsae.WBls:0000038.control_median
54.3158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
626.77From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
785.975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041149.07From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
170.872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
185.758From_analysisRNASeq.briggsae.WBls:0000041.control_median
196.195From_analysisRNASeq.briggsae.WBls:0000041.control_mean
200.643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
264.196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
232.419From_analysisRNASeq.briggsae.WBls:0000041.control_median
274.561From_analysisRNASeq.briggsae.WBls:0000041.control_mean
300.96From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
561.623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
40.1632From_analysisRNASeq.briggsae.WBls:0000063.control_mean
48.7218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
49.3049From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
51.2938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
51.4955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
388.032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
50.2994From_analysisRNASeq.briggsae.WBls:0000063.control_median
98.1413From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101200.643From_analysisRNASeq.briggsae.total_over_all_stages.control_median
228.118From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
226.26From_analysisRNASeq.briggsae.total_over_all_stages.control_median
244.4From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132127
00132128
00132129
00132130
00132131
OrthologWBGene00001564Caenorhabditis elegansFrom_analysisOrthoMCL
OMA
WormBase-Compara
WBGene00007461Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00057839Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00163609Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00094831Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00121875Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g1673Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g644Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18761Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6102Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g8398Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11814Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6648Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1629Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11677Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g28029Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19675Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00299.g8772Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_28943.g27688Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_29059.g27697Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-icl-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold518.g2766Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02326.g25993Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12926Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019498Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00081Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9980Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50035400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g13096Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00259187Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00294046Trichuris murisFrom_analysisWormBase-Compara
WBGene00297581Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable isocitrate lyase activity and malate synthase activity. Predicted to be involved in glyoxylate cycle. Is an ortholog of C. elegans icl-1. In C. elegans, icl-1 is involved in determination of adult lifespan.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06335
Corresponding_CDS_historyCBG06335:bp194
Corresponding_transcriptCBG06335.1
Other_sequenceFC541978.1
EX556537.1
EX007334.1
ASC25612_1
FK800519.1
ASC24796_1
Oden_isotig05465
Dviv_isotig32331
FC541497.1
MI00879
MJC02314_1
MA00087
CR03161
PT01066
AYC01367_2
FK805878.1
Tcol_isotig22193
Acan_isotig05605
CBC15834_1
AF187048.1
AE01437
CR08541
HGC03666_1
AE04934
FK803610.1
AW506054.1
TDC01692_1
FK804358.1
FC549444.1
MI00448
Oden_isotig05466
ACC03615_1
PPC04882_1
SR02290
FK805010.1
FC548176.1
MI04422
MAC00291_1
FK808212.1
HBC00154_1
CSC01567_1
Tcir_isotig05786
HGC07137_1
GRC03187_1
FK800340.1
FC540940.1
ES740713.1
CR06709
FK807965.1
PPC16020_1
FC555441.1
CJC01012_1
EX015032.1
MJ03127
XI03949
HC06151
CR05560
AE03542
XI04908
FK803915.1
CB037012.1
PT02591
FK800807.1
MJ02345
EX558867.1
FG589269.1
TIC00171_1
PPC03332_1
Acan_isotig15338
AYC01367_1
HSC00387_1
Oden_isotig05467
MA02505
EX565860.1
Oden_isotig05462
EX010031.1
MIC01879_1
MA02057
PTC00368_1
EL888018.1
PT00695
JI165821.1
AYC02321_1
ES413516.1
BXC01116_1
Hbac_isotig00512
Tcol_isotig03900
AE00930
FK805634.1
HG08946
AE01181
XIC05545_1
Tcol_isotig18586
EX015094.1
CBC12019_1
CBC00208_1
TDC00774_1
PTC02351_1
AS01541
FG589268.1
TDC00433_1
CBC13865_1
PPC08865_1
Dviv_isotig05125
FG619363.1
Acan_isotig14410
EX007788.1
Acan_isotig19834
Tcol_isotig03899
PPC06647_1
ACC21448_1
PT02891
MI01997
FK801682.1
AE02457
MA00488
FG588794.1
AE04162
GW410943.1
EX560839.1
ES409050.1
MJC01180_1
FK804601.1
Tcol_isotig18451
MJ04009
Hbac_isotig03072
BUC00400_1
PTC00864_1
MHC00184_1
Oden_isotig05464
PSC01513_2
HO652363.1
FD515196.1
Oden_isotig05468
FG975051.1
ACC04339_1
GO239180.1
CB038666.1
EX552576.1
FK801414.1
XIC03796_1
HG04521
AE00313
CRC00083_1
AYC01665_1
FK808721.1
EE724201.1
FC817597.1
FK807680.1
SRC02429_1
EX913495.1
Acan_isotig07892
FC553876.1
XI01217
FK801402.1
SR02429
Acan_isotig05604
FK805190.1
FK808687.1
FK670269.1
CB039200.1
EX555766.1
Oden_isotig05463
PT00271
FK804426.1
HG00709
HS00738
EX007702.1
HBC05403_1
CBC12468_1
GRC00299_1
BXC00459_1
PP00724
MH03098
MJC01392_1
MIC00655_1
FC539727.1
XIC00686_1
TV00265
AE01152
GR13149
GRC02275_1
Oden_isotig05469
ACC16748_1
MJ02175
BXC02061_1
SS02736
Dviv_isotig05126
AJ616380.1
FC811995.1
FC549746.1
AS17955
SRC01613_1
BUC00276_1
FK801859.1
MAC00206_1
CJC01665_1
PVC03980_1
FC544689.1
AYC03153_1
EX916265.1
FC547478.1
AB186896.1
SSC05860_1
Tcir_isotig19771
ES744080.1
TVC00225_1
CJC00737_1
FK807059.1
Experimental_infoExpr_patternExpr1063657
Microarray_resultsGPL8303_CB6_WBGene00028630_A
GPL8303_CB6_WBGene00028630_B
GPL8303_CB6_WBGene00028630_C
GPL8303_CB6_WBGene00028630_D
GPL8303_CB6_WBGene00028630_E
GPL14143_CBG06335_1774-1833_0.866_34_C
GPL14143_CBG06335_2208-2267_0.868_31_B
GPL14143_CBG06335_2470-2529_0.926_6_A
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_upregulated
WBPaper00051425:CB_L4_vs_embryo_upregulated
MethodGene