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WormBase Tree Display for Gene: WBGene00029046

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Name Class

WBGene00029046SMapS_parentSequencecb25.fpc0201
IdentityVersion1
NameCGC_nameCbr-bud-13From_analysisInferred_from_orthology
Sequence_nameCBG06840
Molecular_nameCBG06840
CBG06840.1
CBP07483
Other_nameCBG_06840Accession_evidenceNDBHE601347
Public_nameCBG06840
DB_infoDatabaseNDBlocus_tagCBG_06840
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
228 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-bud-13
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbud
RNASeq_FPKMWBls:000000222.6799From_analysisRNASeq.briggsae.WBls:0000002.control_mean
22.8578From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
37.3295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.85245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
18.4779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
20.6679From_analysisRNASeq.briggsae.WBls:0000002.control_median
21.6294From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000372.0173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
83.3441From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
94.6709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
66.2927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
77.6603From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000423.9406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
26.7276From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
29.5147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
25.478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
26.2806From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
26.5452From_analysisRNASeq.briggsae.WBls:0000004.control_mean
27.5121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.489421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.00316From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.43598From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.81535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
15.9359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.90926From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.56096From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003512.0571From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.9862From_analysisRNASeq.briggsae.WBls:0000038.control_median
14.0984From_analysisRNASeq.briggsae.WBls:0000038.control_mean
20.922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
23.1399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.28137From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.05045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004121.2018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
33.2191From_analysisRNASeq.briggsae.WBls:0000041.control_mean
36.9175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
36.9313From_analysisRNASeq.briggsae.WBls:0000041.control_median
36.945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
37.8122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
19.7373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
25.0515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
29.6109From_analysisRNASeq.briggsae.WBls:0000041.control_mean
30.9845From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006311.0482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
13.5011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
13.6457From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
13.6599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.2015From_analysisRNASeq.briggsae.WBls:0000063.control_mean
29.1525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
13.6528From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.4537From_analysisRNASeq.briggsae.WBls:0000063.control_mean
29.7148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010113.6599From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.6706From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
20.3297From_analysisRNASeq.briggsae.total_over_all_stages.control_median
23.2349From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (28)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Pre-mRNA-splicing factor of RES complex and Bud13. Is an ortholog of C. elegans bud-13.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06840
Corresponding_CDS_historyCBG06840:bp194
Corresponding_transcriptCBG06840.1
Other_sequence (31)
Experimental_infoExpr_patternExpr1054239
Microarray_resultsGPL8303_CB6_WBGene00029046_A
GPL8303_CB6_WBGene00029046_B
GPL14143_CBG06840_360-419_0.894_21_B
GPL14143_CBG06840_695-754_0.884_24_C
GPL14143_CBG06840_790-849_0.813_65_A
MethodGene