Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00029104

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00029104SMapS_parentSequencecb25.fpc0201
IdentityVersion2
NameCGC_nameCbr-mtss-1From_analysisInferred_from_orthology
Sequence_nameCBG06914
Molecular_nameCBG06914
CBG06914.1
CBP07509
Other_nameCBG_06914Accession_evidenceNDBHE601347
Public_nameCbr-mtss-1
DB_infoDatabaseNDBlocus_tagCBG_06914
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
223 Oct 2007 13:09:01WBPerson2970Name_changeCGC_nameCbr-mtss-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmtss
RNASeq_FPKMWBls:000000280.259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
80.9279From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
84.6097From_analysisRNASeq.briggsae.WBls:0000002.control_mean
92.6423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
86.7851From_analysisRNASeq.briggsae.WBls:0000002.control_median
87.3033From_analysisRNASeq.briggsae.WBls:0000002.control_mean
95.3841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000332.8621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
34.1844From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
35.5068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
30.3338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
32.9009From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000454.9926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
55.6796From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
56.3665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
38.1888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
54.757From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
55.0642From_analysisRNASeq.briggsae.WBls:0000004.control_mean
71.0159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002714.645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
37.0909From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
38.3185From_analysisRNASeq.briggsae.WBls:0000027.control_mean
63.2197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
47.3435From_analysisRNASeq.briggsae.WBls:0000027.control_mean
50.1553From_analysisRNASeq.briggsae.WBls:0000027.control_median
74.4185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003576.3606From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038102.433From_analysisRNASeq.briggsae.WBls:0000038.control_mean
109.6From_analysisRNASeq.briggsae.WBls:0000038.control_median
119.981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
131.599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
58.9323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
99.2198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041122.312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
124.124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
125.431From_analysisRNASeq.briggsae.WBls:0000041.control_median
126.738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
128.221From_analysisRNASeq.briggsae.WBls:0000041.control_mean
139.712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
133.225From_analysisRNASeq.briggsae.WBls:0000041.control_median
138.618From_analysisRNASeq.briggsae.WBls:0000041.control_mean
144.411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
174.413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063101.761From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
113.476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
84.6009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
88.3843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
91.3257From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
95.9096From_analysisRNASeq.briggsae.WBls:0000063.control_mean
102.51From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
96.5434From_analysisRNASeq.briggsae.WBls:0000063.control_median
97.0097From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010178.8901From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
82.7813From_analysisRNASeq.briggsae.total_over_all_stages.control_median
80.8749From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
81.8546From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00132553
00132554
Ortholog (19)
Structured_descriptionAutomated_descriptionPredicted to enable single-stranded DNA binding activity. Predicted to be involved in DNA replication. Is an ortholog of C. elegans mtss-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06914
Corresponding_CDS_historyCBG06914:bp194
Corresponding_transcriptCBG06914.1
Other_sequenceName_isotig02032
Tcol_isotig07408
Tcol_isotig07409
Oden_isotig11098
Oden_isotig11097
Acan_isotig03155
Acan_isotig03156
Oden_isotig11096
CJC03132_1
Experimental_infoExpr_patternExpr1050954
Microarray_resultsGPL8303_CB6_WBGene00029104_A
GPL8303_CB6_WBGene00029104_B
GPL14143_CBG06914_186-245_0.950_6_C
GPL14143_CBG06914_371-430_0.963_1_B
GPL14143_CBG06914_413-472_0.947_8_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene