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WormBase Tree Display for Gene: WBGene00029248

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Name Class

WBGene00029248SMapS_parentSequencecb25.fpc0305a
IdentityVersion2
NameCGC_nameCbr-lips-7From_analysisInferred_from_orthology
Sequence_nameCBG07082
Molecular_nameCBG07082
CBG07082.1
CBP15819
Other_nameCBG_07082Accession_evidenceNDBHE600960
Public_nameCbr-lips-7
DB_infoDatabaseNDBlocus_tagCBG_07082
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:51WBPerson2970Name_changeCGC_nameCbr-lips-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlips
AlleleWBVar00136582
WBVar00136583
WBVar00136584
WBVar00136578
WBVar00136585
WBVar00136579
WBVar00136586
WBVar00136580
WBVar00136587
WBVar00136581
RNASeq_FPKMWBls:000000211.7245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
13.4995From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
13.6894From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.8443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.3139From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.612From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.18731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.925625From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.85125From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.698888From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.850046From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.0892From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
8.54376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.31648From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.0449From_analysisRNASeq.briggsae.WBls:0000004.control_mean
10.4691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
11.8063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
9.31632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (11)
WBls:0000027100.739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.65056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
37.6006From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.41235From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
23.5797From_analysisRNASeq.briggsae.WBls:0000027.control_median
37.6372From_analysisRNASeq.briggsae.WBls:0000027.control_mean
37.7471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.1078From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.9757From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.90536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
20.0914From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.3028From_analysisRNASeq.briggsae.WBls:0000038.control_mean
27.2072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
39.1228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.271447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.340159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.911349From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.38858From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.48254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.46017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.58949From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.67948From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.87643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.1062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000632.43475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.46471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.52099From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.96859From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.54267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.87984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.177415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
2.49285From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.5034From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.65056From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.77295From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.00255From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.52107From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132708
00132709
Ortholog (26)
Paralog (17)
Structured_descriptionAutomated_descriptionPredicted to enable hydrolase activity. Predicted to be involved in lipid catabolic process. Is an ortholog of C. elegans lips-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07082
Corresponding_CDS_historyCBG07082:bp194
Corresponding_transcriptCBG07082.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1069608
Microarray_resultsGPL8303_CB6_WBGene00029248_A
GPL8303_CB6_WBGene00029248_B
GPL14143_CBG07082_375-434_0.760_45_B
GPL14143_CBG07082_636-695_0.884_1_A
GPL14143_CBG07082_779-838_0.863_8_C
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene