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WormBase Tree Display for Gene: WBGene00029482

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Name Class

WBGene00029482SMapS_parentSequencecb25.fpc0829
IdentityVersion2
NameCGC_nameCbr-cah-4From_analysisInferred_from_orthology
Sequence_nameCBG07426
Molecular_nameCBG07426a
CBG07426a.1
CBP16019
CBG07426b
CBP41972
CBG07426b.1
Other_nameCBG_07426Accession_evidenceNDBHE601041
Public_nameCbr-cah-4
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-cah-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcah
RNASeq_FPKMWBls:0000002113.366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
123.219From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
129.954From_analysisRNASeq.briggsae.WBls:0000002.control_mean
153.276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
125.874From_analysisRNASeq.briggsae.WBls:0000002.control_median
128.529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
129.598From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.4891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
5.05716From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
8.62521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
5.31347From_analysisRNASeq.briggsae.WBls:0000003.control_mean
5.8261From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000418.9591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
21.1154From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
23.2718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
22.8009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
24.4598From_analysisRNASeq.briggsae.WBls:0000004.control_mean
27.365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
29.9022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027205.394From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
22.6391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
66.2148From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
98.0826From_analysisRNASeq.briggsae.WBls:0000027.control_mean
131.195From_analysisRNASeq.briggsae.WBls:0000027.control_mean
135.804From_analysisRNASeq.briggsae.WBls:0000027.control_median
230.532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035272.837From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038161.552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
169.106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
234.012From_analysisRNASeq.briggsae.WBls:0000038.control_median
259.598From_analysisRNASeq.briggsae.WBls:0000038.control_mean
298.917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
408.818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041103.804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
140.365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
153.779From_analysisRNASeq.briggsae.WBls:0000041.control_mean
160.464From_analysisRNASeq.briggsae.WBls:0000041.control_median
180.562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
190.387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
170.383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
175.473From_analysisRNASeq.briggsae.WBls:0000041.control_median
189.314From_analysisRNASeq.briggsae.WBls:0000041.control_mean
350.384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063131.784From_analysisRNASeq.briggsae.WBls:0000063.control_mean
151.104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
153.753From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
165.352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
188.712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
124.482From_analysisRNASeq.briggsae.WBls:0000063.control_mean
152.428From_analysisRNASeq.briggsae.WBls:0000063.control_median
87.9736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101153.753From_analysisRNASeq.briggsae.total_over_all_stages.control_median
161.823From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
151.226From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
152.19From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00132881
00132882
Contained_in_operonCBOPA0729
Ortholog (23)
ParalogWBGene00032185Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033006Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033874Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036319Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041439Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbonate dehydratase activity and zinc ion binding activity. Is an ortholog of C. elegans cah-4. In C. elegans, cah-4 is involved in small molecule metabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07426a
CBG07426b
Corresponding_CDS_historyCBG07426:bp194
Corresponding_transcriptCBG07426a.1
CBG07426b.1
Other_sequence (39)
Experimental_infoExpr_patternExpr1053347
Microarray_resultsGPL8303_CB6_WBGene00029482_A
GPL8303_CB6_WBGene00029482_B
GPL14143_CBG07426_150-209_0.787_23_C
GPL14143_CBG07426_345-404_0.679_58_B
GPL14143_CBG07426_420-479_0.851_8_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene