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WormBase Tree Display for Gene: WBGene00029659

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Name Class

WBGene00029659SMapS_parentSequencecb25.fpc0829
IdentityVersion2
NameCGC_nameCbr-psa-3From_analysisInferred_from_orthology
Sequence_nameCBG07694
Molecular_nameCBG07694
CBG07694.1
CBP43755
Other_nameCBG_07694Accession_evidenceNDBHE601041
Public_nameCbr-psa-3
DB_infoDatabaseNDBlocus_tagCBG_07694
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-psa-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpsa
RNASeq_FPKMWBls:00000021.24904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.51418From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.27531From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.06271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.74665From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.97912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.95126From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.705855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.885448From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.06504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.590298From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000045.76074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
6.04288From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.32503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
6.41424From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.78227From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.96927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
8.44209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.128647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.37218From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.62715From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.38063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.92491From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.08977From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.47764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.29481From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.688614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.55506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.67814From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.80122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.47332From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.84839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.448874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.468749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.488502From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.508255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.565414From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.835777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.386988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.420188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.458811From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.511472From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630.778378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.30705From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.53687From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.71465From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.50534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.296559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.13863From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.15762From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001011.51418From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.24722From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.52552From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.4883From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (22)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: N-terminal of Homeobox Meis and PKNOX1 and Homeobox protein PKNOX/Meis, N-terminal. Is an ortholog of C. elegans psa-3. In C. elegans, psa-3 is involved in regulation of asymmetric cell division.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07694
Corresponding_CDS_historyCBG07694:bp255
Corresponding_transcriptCBG07694.1
Experimental_infoExpr_patternExpr1059211
Microarray_resultsGPL8303_CB6_WBGene00029659_A
GPL8303_CB6_WBGene00029659_B
GPL8303_CB6_WBGene00029659_C
GPL8303_CB6_WBGene00029659_D
GPL8303_CB6_WBGene00029659_E
GPL14143_CBG07694_152-211_0.885_13_B
GPL14143_CBG07694_266-325_0.575_78_A
GPL14143_CBG07694_413-472_0.932_1_C
MethodGene