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WormBase Tree Display for Gene: WBGene00029955

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Name Class

WBGene00029955SMapS_parentSequencecb25.fpc1402c
IdentityVersion2
NameCGC_nameCbr-sel-12From_analysisInferred_from_orthology
Sequence_nameCBG08092
Molecular_nameCBG08092a
CBG08092a.1
CBP32225
CBG08092b
CBP45381
CBG08092b.1
Other_nameCBG_08092Accession_evidenceNDBHE600971
Public_nameCbr-sel-12
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-sel-12
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsel
RNASeq_FPKMWBls:000000212.0994From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
13.3338From_analysisRNASeq.briggsae.WBls:0000002.control_mean
17.9157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.98641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
11.0429From_analysisRNASeq.briggsae.WBls:0000002.control_median
12.0608From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.24177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000353.9186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
58.2464From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
62.5743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
45.703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
54.0653From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000471.6273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
72.7723From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
73.9173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
73.6309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
75.7412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
75.83From_analysisRNASeq.briggsae.WBls:0000004.control_mean
84.2334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.084688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
18.3489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.01159From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.81506From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.2082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.6099From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.41335From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003516.8914From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
12.5571From_analysisRNASeq.briggsae.WBls:0000038.control_mean
13.3736From_analysisRNASeq.briggsae.WBls:0000038.control_median
14.2591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
20.3034From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.17783From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000414.18334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.67708From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.32129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
8.62628From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.93126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
9.27245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.25616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.05579From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.33672From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.68854From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.18999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.48407From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.08286From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.14672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
7.00077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.90489From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.61479From_analysisRNASeq.briggsae.WBls:0000063.control_median
7.00899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010112.0994From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.146From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.2937From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.2977From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133367
00133368
00133369
00133370
00133371
Contained_in_operonCBOPA0175
Ortholog (36)
ParalogWBGene00032965Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032967Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033101Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable aspartic endopeptidase activity, intramembrane cleaving. Predicted to be involved in egg-laying behavior; nervous system development; and protein processing. Predicted to be located in membrane. Is an ortholog of C. elegans sel-12. In C. elegans, sel-12 is involved in several processes, including apical protein localization; egg-laying behavior; and regulation of signal transduction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08092a
CBG08092b
Corresponding_CDS_historyCBG08092:bp194
Corresponding_transcriptCBG08092a.1
CBG08092b.1
Other_sequence (67)
Experimental_infoExpr_patternExpr1067535
Microarray_resultsGPL8303_CB6_WBGene00029955_A
GPL14143_CBG08092_552-611_0.806_10_B
GPL14143_CBG08092_693-752_0.773_39_C
GPL14143_CBG08092_1275-1334_0.572_180_A
MethodGene