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WormBase Tree Display for Gene: WBGene00030412

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Name Class

WBGene00030412SMapS_parentSequencecb25.fpc2051
IdentityVersion2
NameCGC_nameCbr-pqn-51From_analysisInferred_from_orthology
Sequence_nameCBG08658
Molecular_nameCBG08658
CBG08658.1
CBP45453
Other_nameCBG_08658Accession_evidenceNDBHE601197
Public_nameCbr-pqn-51
DB_infoDatabaseNDBlocus_tagCBG_08658
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-pqn-51
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpqn
RNASeq_FPKMWBls:000000250.889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
77.3703From_analysisRNASeq.briggsae.WBls:0000002.control_mean
84.9603From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
96.2615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
117.778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
87.4722From_analysisRNASeq.briggsae.WBls:0000002.control_mean
90.6109From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003192.805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
193.663From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
194.521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
195.798From_analysisRNASeq.briggsae.WBls:0000003.control_mean
200.069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000487.0843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
87.7288From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
88.3732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
73.8689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
80.5201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
84.2578From_analysisRNASeq.briggsae.WBls:0000004.control_mean
91.4427From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.9764From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
13.585From_analysisRNASeq.briggsae.WBls:0000027.control_mean
26.0512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.72732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
18.5138From_analysisRNASeq.briggsae.WBls:0000027.control_median
21.4274From_analysisRNASeq.briggsae.WBls:0000027.control_mean
44.9546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003536.3181From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003824.0974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
33.8566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
37.5191From_analysisRNASeq.briggsae.WBls:0000038.control_median
37.774From_analysisRNASeq.briggsae.WBls:0000038.control_mean
41.1817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
51.9603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:0000041121.574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
165.115From_analysisRNASeq.briggsae.WBls:0000041.control_mean
176.259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
177.337From_analysisRNASeq.briggsae.WBls:0000041.control_median
178.416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
184.211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
101.301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
145.458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
151.203From_analysisRNASeq.briggsae.WBls:0000041.control_mean
160.859From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
56.7077From_analysisRNASeq.briggsae.WBls:0000063.control_mean
66.0351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
66.3525From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
69.5889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
81.5619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
63.7096From_analysisRNASeq.briggsae.WBls:0000063.control_mean
67.9707From_analysisRNASeq.briggsae.WBls:0000063.control_median
98.7194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010151.9603From_analysisRNASeq.briggsae.total_over_all_stages.control_median
73.1364From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
71.7289From_analysisRNASeq.briggsae.total_over_all_stages.control_median
80.9228From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133803
00133804
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to be involved in transcription initiation at RNA polymerase II promoter. Predicted to be part of transcription factor TFIIA complex. Is an ortholog of C. elegans pqn-51.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08658
Corresponding_CDS_historyCBG08658:bp194
CBG08658:bp255
Corresponding_transcriptCBG08658.1
Other_sequence (62)
Experimental_infoExpr_patternExpr1058696
Microarray_resultsGPL8303_CB6_WBGene00030412_A
GPL8303_CB6_WBGene00030412_B
GPL8303_CB6_WBGene00030412_C
GPL14143_CBG08658_824-883_0.856_35_B
GPL14143_CBG08658_838-897_0.781_93_C
GPL14143_CBG08658_962-1021_0.940_2_A
MethodGene