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WormBase Tree Display for Gene: WBGene00030741

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Name Class

WBGene00030741SMapS_parentSequencecb25.fpc2187
IdentityVersion2
NameCGC_nameCbr-mdt-15From_analysisInferred_from_orthology
Sequence_nameCBG09077
Molecular_nameCBG09077
CBG09077.1
CBP42767
Other_nameCBG_09077Accession_evidenceNDBHE601284
Public_nameCbr-mdt-15
DB_infoDatabaseNDBlocus_tagCBG_09077
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-mdt-15
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmdt
RNASeq_FPKMWBls:000000215.6691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
177.089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
78.3022From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
90.3534From_analysisRNASeq.briggsae.WBls:0000002.control_mean
46.9933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
62.6478From_analysisRNASeq.briggsae.WBls:0000002.control_median
79.5134From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003102.939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
149.546From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
196.154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
131.519From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
143.537From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004100.007From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
79.7235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
89.8652From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
104.281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
76.8442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
90.391From_analysisRNASeq.briggsae.WBls:0000004.control_mean
91.0994From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002744.0951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
47.4862From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
52.6421From_analysisRNASeq.briggsae.WBls:0000027.control_mean
66.3449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
177.331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
56.9156From_analysisRNASeq.briggsae.WBls:0000027.control_median
83.8143From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035166.038From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038152.941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
155.717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
26.0315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
32.3894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
91.7697From_analysisRNASeq.briggsae.WBls:0000038.control_mean
92.6652From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004134.6018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
41.1303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
41.4932From_analysisRNASeq.briggsae.WBls:0000041.control_mean
41.8209From_analysisRNASeq.briggsae.WBls:0000041.control_median
42.5116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
47.7291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
25.0364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
30.0283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
36.8396From_analysisRNASeq.briggsae.WBls:0000041.control_mean
37.8661From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006325.1822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
33.5836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
34.0149From_analysisRNASeq.briggsae.WBls:0000063.control_mean
34.5783From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
37.5107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
39.2198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
36.0445From_analysisRNASeq.briggsae.WBls:0000063.control_median
37.5892From_analysisRNASeq.briggsae.WBls:0000063.control_mean
55.4609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010147.4862From_analysisRNASeq.briggsae.total_over_all_stages.control_median
74.2689From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
51.595From_analysisRNASeq.briggsae.total_over_all_stages.control_median
76.1156From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134148
00134149
Ortholog (29)
ParalogWBGene00024853Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030701Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087252Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087253Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable transcription coregulator activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans mdt-15. In C. elegans, mdt-15 is involved in several processes, including determination of adult lifespan; nematode larval development; and sequestering of triglyceride.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09077
Corresponding_CDS_historyCBG09077:bp194
CBG09077:bp255
Corresponding_transcriptCBG09077.1
Other_sequence (30)
Experimental_infoExpr_patternExpr1066889
Microarray_resultsGPL8303_CB6_WBGene00030741_A
GPL14143_CBG09077_1803-1862_0.849_63_C
GPL14143_CBG09077_2038-2097_0.925_9_B
GPL14143_CBG09077_2157-2216_0.865_49_A
MethodGene