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WormBase Tree Display for Gene: WBGene00030745

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Name Class

WBGene00030745SMapS_parentSequencecb25.fpc2187
IdentityVersion3
NameCGC_nameCbr-rev-3From_analysisInferred_from_orthology
Sequence_nameCBG09081
Molecular_nameCBG09081
CBG09081.1
CBP49348
Other_nameCBG_09081Accession_evidenceNDBHE601284
Public_nameCbr-rev-3
DB_infoDatabaseNDBlocus_tagCBG_09081
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
224 Jul 2008 11:56:33WBPerson1847EventAcquires_mergeWBGene00030746
308 Feb 2019 15:42:26WBPerson1983Name_changeCGC_nameCbr-rev-3
Acquires_mergeWBGene00030746
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrev
AlleleWBVar00114367
WBVar00114368
WBVar00114371
RNASeq_FPKMWBls:00000021.59627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.30433From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.63989From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.67683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.53483From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.9331From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.22631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000033.65545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.25459From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.85373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
4.25566From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.2578From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.12072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.13272From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.14472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.15431From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.16514From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.18786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.21808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.108612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.732449From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.761164From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.44243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.83072From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.88592From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.03939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.33743From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.583696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.30646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.62367From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.80197From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.94089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.37684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004110.2695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
10.369From_analysisRNASeq.briggsae.WBls:0000041.control_median
10.4685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.1729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.15644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
9.51684From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.93294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.55476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
9.09251From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.41213From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000633.28954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.4398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.67337From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.74223From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.84118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6.46724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.75728From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.80651From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.12791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.94089From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.37858From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.61522From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.49153From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134150
00134151
00134152
00134153
00134154
00134155
00134156
Ortholog (36)
ParalogWBGene00033984Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041727Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity; DNA-directed DNA polymerase activity; and nucleotide binding activity. Predicted to be involved in translesion synthesis. Predicted to be part of zeta DNA polymerase complex. Is an ortholog of C. elegans rev-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09081
Corresponding_CDS_historyCBG09081:bp194
CBG09081:bp266
Corresponding_transcriptCBG09081.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1051265
Microarray_resultsGPL8303_CB6_WBGene00030745_A
GPL8303_CB6_WBGene00030745_B
GPL8303_CB6_WBGene00030746_A
GPL14143_CBG09081_4620-4679_0.942_3_C
GPL14143_CBG09081_4962-5021_0.944_2_B
GPL14143_CBG09081_4966-5025_0.951_1_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene