WormBase Tree Display for Gene: WBGene00030749

WBGene00030749 SMap: S_parent: Sequence: cb25.fpc2187
  Identity: Version: 2
    Name: CGC_name: Cbr-ceh-10 From_analysis: Inferred_from_orthology
      Sequence_name: CBG09085
      Molecular_name: CBG09085
        CBG09085.1
        CBP02217
      Other_name: CBG_09085 Accession_evidence: NDB HE601284
      Public_name: Cbr-ceh-10
    DB_info: Database: NDB locus_tag CBG_09085
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-ceh-10
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ceh
    Allele: WBVar00137026
      WBVar00114391
      WBVar00114392
      WBVar00114393
      WBVar00114394
      WBVar00114388
      WBVar00114389
      WBVar00114395
      WBVar00114390
    RNASeq_FPKM: WBls:0000002 0.215447 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.903342 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.02127 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.47331 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.671013 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.84526 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.846142 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 2.49066 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        4.36129 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        6.23192 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        3.4799 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        4.06749 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 11.0631 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        11.744 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        12.4249 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        12.3845 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        13.6034 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        14.8346 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        9.99655 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 0.108849 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.601616 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.696 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.43813 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.643065 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.767412 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 1.55024 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.166611 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.557327 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0.77914 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.780923 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.00452 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        1.3881 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.126672 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.213956 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.233076 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.239381 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.264806 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.326871 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.262341 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.263573 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.267581 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.410837 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.052971 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.264857 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.118021 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.443271 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.557327 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.78724 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.719212 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.53419 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00134163
    Ortholog (27)
    Paralog (20)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans ceh-10. In C. elegans, ceh-10 is involved in several processes, including egg-laying behavior; generation of neurons; and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG09085
    Corresponding_transcript: CBG09085.1
    Other_sequence (14)
  Experimental_info: Expr_pattern: Expr1062842
    Microarray_results: GPL8303_CB6_WBGene00030749_A
      GPL8303_CB6_WBGene00030749_C
      GPL8303_CB6_WBGene00030749_D
      GPL8303_CB6_WBGene00030749_E
      GPL14143_CBG09085_131-190_0.777_69_B
      GPL14143_CBG09085_367-426_0.877_27_C
      GPL14143_CBG09085_442-501_0.909_16_A
  Method: Gene