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WormBase Tree Display for Gene: WBGene00030975

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Name Class

WBGene00030975SMapS_parentSequencecb25.fpc2220a
IdentityVersion2
NameCGC_nameCbr-hpo-15From_analysisInferred_from_orthology
Sequence_nameCBG09379
Molecular_nameCBG09379
CBG09379.1
CBP02297
Other_nameCBG_09379Accession_evidenceNDBHE600954
Public_nameCbr-hpo-15
DB_infoDatabaseNDBlocus_tagCBG_09379
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
226 Apr 2011 13:45:33WBPerson2970Name_changeCGC_nameCbr-hpo-15
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhpo
AlleleWBVar00137066
RNASeq_FPKMWBls:000000240.4464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
60.1898From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
62.7566From_analysisRNASeq.briggsae.WBls:0000002.control_mean
87.6337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
61.1573From_analysisRNASeq.briggsae.WBls:0000002.control_median
62.1249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
62.5987From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000338.3216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
41.278From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
44.2343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
46.3542From_analysisRNASeq.briggsae.WBls:0000003.control_mean
56.5068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000428.9183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
29.0226From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
29.127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
26.0576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
28.7437From_analysisRNASeq.briggsae.WBls:0000004.control_mean
29.2773From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
30.3383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.0464From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.44263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
26.6402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.05647From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
15.8483From_analysisRNASeq.briggsae.WBls:0000027.control_median
20.48From_analysisRNASeq.briggsae.WBls:0000027.control_mean
48.7809From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003542.8667From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.9383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
50.2049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
51.0508From_analysisRNASeq.briggsae.WBls:0000038.control_mean
54.0052From_analysisRNASeq.briggsae.WBls:0000038.control_median
57.8056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
83.2544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041106.256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
106.615From_analysisRNASeq.briggsae.WBls:0000041.control_median
106.973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
135.181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
46.5023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
98.7281From_analysisRNASeq.briggsae.WBls:0000041.control_mean
66.0069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
71.1656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
88.6808From_analysisRNASeq.briggsae.WBls:0000041.control_mean
88.7108From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
44.8559From_analysisRNASeq.briggsae.WBls:0000063.control_mean
53.494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
54.0728From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
56.8838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
59.8288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
50.365From_analysisRNASeq.briggsae.WBls:0000063.control_mean
55.4783From_analysisRNASeq.briggsae.WBls:0000063.control_median
77.9106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010150.2049From_analysisRNASeq.briggsae.total_over_all_stages.control_median
52.68From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
51.8494From_analysisRNASeq.briggsae.total_over_all_stages.control_median
52.5234From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134414
Ortholog (28)
ParalogWBGene00027980Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029850Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029889Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038984Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039201Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041792Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Is an ortholog of C. elegans hpo-15.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09379
Corresponding_CDS_historyCBG09379:bp194
Corresponding_transcriptCBG09379.1
Other_sequence (27)
Experimental_infoExpr_patternExpr1058199
Microarray_resultsGPL8303_CB6_WBGene00030975_A
GPL14143_CBG09379_1133-1192_0.925_11_C
GPL14143_CBG09379_1258-1317_0.951_2_A
GPL14143_CBG09379_1358-1417_0.938_4_B
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
MethodGene