WormBase Tree Display for Gene: WBGene00030985

WBGene00030985 SMap: S_parent: Sequence: cb25.fpc2220a
  Identity: Version: 2
    Name: CGC_name: Cbr-rhr-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG09391
      Molecular_name: CBG09391
        CBG09391.1
        CBP24903
      Other_name: CBG_09391 Accession_evidence: NDB HE600954
      Public_name: Cbr-rhr-1
    DB_info: Database: NDB locus_tag CBG_09391
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-rhr-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rhr
    RNASeq_FPKM: WBls:0000002 135.913 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        144.466 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        179.498 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        83.7734 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        114.12 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        122.569 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        82.5379 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.104407 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.270638 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.436868 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0.446764 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.799018 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 3.66734 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        4.24411 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        4.82088 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        3.20901 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        3.59235 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        4.06031 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        5.01197 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 20.2005 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        45.1947 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        50.3387 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        65.0449 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        109.088 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        57.6918 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        61.168 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 186.513 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 154.549 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        167.552 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        180.555 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        204.064 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        399.084 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        82.0666 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 102.751 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        103.774 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        110.24 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        125.266 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        84.3269 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        95.2624 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        103.26 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        120.667 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        83.8005 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 152.568 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        174.703 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        186.769 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        197.376 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        203.994 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        155.212 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        168.431 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        180.736 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 110.24 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        121.483 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        107.899 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        89.9767 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00134435
      00134436
      00134437
      00134438
    Contained_in_operon: CBOPA0308
    Ortholog (32)
    Paralog: WBGene00041663 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ammonium transmembrane transporter activity. Predicted to be involved in ammonium transmembrane transport. Predicted to be located in plasma membrane. Is an ortholog of C. elegans rhr-1. In C. elegans, rhr-1 is involved in ammonium transmembrane transport. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG09391
    Corresponding_CDS_history: CBG09391:bp167
    Corresponding_transcript: CBG09391.1
    Other_sequence (61)
  Experimental_info: Expr_pattern: Expr1063811
    Microarray_results: GPL8303_CB6_WBGene00030985_A
      GPL8303_CB6_WBGene00030985_C
      GPL14143_CBG09391_582-641_0.901_10_C
      GPL14143_CBG09391_978-1037_0.824_37_B
      GPL14143_CBG09391_1246-1305_0.939_3_A
  Method: Gene