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WormBase Tree Display for Gene: WBGene00031042

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Name Class

WBGene00031042SMapS_parentSequencecb25.fpc2220b
IdentityVersion2
NameCGC_nameCbr-pqn-22From_analysisInferred_from_orthology
Sequence_nameCBG09470
Molecular_name (15)
Other_nameCBG_09470Accession_evidenceNDBHE600933
Public_nameCbr-pqn-22
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-pqn-22
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpqn
RNASeq_FPKMWBls:000000217.0758From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
53.1978From_analysisRNASeq.briggsae.WBls:0000002.control_mean
65.8217From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
76.6959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
32.7829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
48.0941From_analysisRNASeq.briggsae.WBls:0000002.control_mean
49.3023From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000031.2504From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.50081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.26022From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.27986From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000044.27753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
4.32469From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.37184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
4.05838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
4.56365From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.82369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.28682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002713.7746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
37.0574From_analysisRNASeq.briggsae.WBls:0000027.control_mean
37.8735From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
59.5241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
48.6988From_analysisRNASeq.briggsae.WBls:0000027.control_median
51.9112From_analysisRNASeq.briggsae.WBls:0000027.control_mean
96.4726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003581.8364From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038111.057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
62.8717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
67.472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
74.6568From_analysisRNASeq.briggsae.WBls:0000038.control_median
80.8106From_analysisRNASeq.briggsae.WBls:0000038.control_mean
81.8416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004122.5714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
36.6433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
36.9828From_analysisRNASeq.briggsae.WBls:0000041.control_median
37.3223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
48.2858From_analysisRNASeq.briggsae.WBls:0000041.control_mean
96.6063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
15.9738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
47.4768From_analysisRNASeq.briggsae.WBls:0000041.control_mean
75.7437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006345.5745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
46.1877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
46.9662From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
53.7687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
55.0621From_analysisRNASeq.briggsae.WBls:0000063.control_mean
82.8134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
50.3675From_analysisRNASeq.briggsae.WBls:0000063.control_median
56.3782From_analysisRNASeq.briggsae.WBls:0000063.control_mean
62.9584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010146.9662From_analysisRNASeq.briggsae.total_over_all_stages.control_median
47.5594From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
44.1738From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
45.8811From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (32)
ParalogWBGene00028236Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Zasp-like motif. Is an ortholog of C. elegans pqn-22.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09470a
CBG09470b
CBG09470c
CBG09470d
CBG09470e
Corresponding_CDS_historyCBG09470:bp194
CBG09470:bp255
Corresponding_transcriptCBG09470a.1
CBG09470b.1
CBG09470c.1
CBG09470d.1
CBG09470e.1
Other_sequence (36)
Experimental_infoExpr_patternExpr1070005
Microarray_resultsGPL8303_CB6_WBGene00031042_A
GPL8303_CB6_WBGene00031042_B
GPL14143_CBG09470_496-555_0.800_134_C
GPL14143_CBG09470_867-926_0.759_205_A
GPL14143_CBG09470_1157-1216_0.702_303_B
MethodGene