WormBase Tree Display for Gene: WBGene00031052

WBGene00031052 SMap: S_parent: Sequence: cb25.fpc2220c
  Identity: Version: 2
    Name: CGC_name: Cbr-far-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG09481
      Molecular_name: CBG09481
        CBG09481.1
        CBP08231
      Other_name: CBG_09481 Accession_evidence: NDB HE600998
      Public_name: Cbr-far-3
    DB_info: Database: NDB locus_tag CBG_09481
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:05 WBPerson2970 Name_change: CGC_name: Cbr-far-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: far
    Allele: WBVar00114931
      WBVar00114932
      WBVar00114929
      WBVar00114930
    RNASeq_FPKM: WBls:0000002 147.212 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        242.491 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        273.946 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        432.136 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        194.852 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        225.119 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        78.6378 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.102067 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.204133 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.068044 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 76.0912 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        76.9613 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        77.8313 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        63.3029 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        66.9671 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        72.3709 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        77.6619 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.305914 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        10.5206 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        31.2558 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.629767 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.953621 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        8.12883 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 11.9209 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.000131 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.566382 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        259.046 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        26.7538 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        52.9412 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        78.1384 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 0.677404 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        14.0597 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.79102 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        18.4495 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        57.2699 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        7.92536 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        23.5826 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        26.2158 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        33.1054 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        50.3912 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 1.12623 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.48458 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.92126 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        2.22532 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        8e-06 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.742294 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.938528 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 11.9209 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        56.1474 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        20.5245 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        52.613 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00134513
    Ortholog (27)
    Paralog: WBGene00028587 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029024 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029025 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029218 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031053 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042354 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lipid binding activity. Is an ortholog of C. elegans far-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG09481
    Corresponding_CDS_history: CBG09481:bp194
    Corresponding_transcript: CBG09481.1
    Other_sequence (34)
  Experimental_info: Expr_pattern: Expr1056988
    Microarray_results: GPL8303_CB6_WBGene00031052_A
      GPL14143_CBG09481_61-120_0.915_4_C
      GPL14143_CBG09481_344-403_0.941_1_B
      GPL14143_CBG09481_512-571_0.856_17_A
    Expression_cluster: WBPaper00059178:Cbr-spr-4(gu163)_upregulated
  Method: Gene