WormBase Tree Display for Gene: WBGene00031137

WBGene00031137 SMap: S_parent: Sequence: cb25.fpc2220c
  Identity: Version: 2
    Name: CGC_name: Cbr-col-149 From_analysis: Inferred_from_orthology
      Sequence_name: CBG09576
      Molecular_name: CBG09576
        CBG09576.1
        CBP02330
      Other_name: CBG_09576 Accession_evidence: NDB HE600998
      Public_name: Cbr-col-149
    DB_info: Database: NDB locus_tag CBG_09576
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-col-149
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000002 261.953 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        268.258 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        459.265 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        58.3376 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        163.298 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        208.364 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        47.5968 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.040819 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.204093 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 23.012 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        28.3882 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        28.9456 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        35.4366 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        23.9312 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        25.7001 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        8.88809 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 386.446 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 113.119 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        275.266 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        283.011 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        437.413 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        493.426 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        88.0864 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 11.9634 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        22.1994 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        36.3261 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        39.7341 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        50.4528 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        74.3207 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        25.7484 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        29.2974 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        32.2587 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.3183 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        73.8905 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        88.6171 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        90.8436 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        93.7319 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        96.2597 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        47.023 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        69.4126 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        89.7303 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 111.632 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        50.4528 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        28.8428 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        88.833 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00134603
    Ortholog (23)
    Paralog (156)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-149. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG09576
    Corresponding_CDS_history: CBG09576:bp194
    Corresponding_transcript: CBG09576.1
    Other_sequence (60)
  Experimental_info: Expr_pattern: Expr1067825
    Microarray_results: GPL8303_CB6_WBGene00031137_A
      GPL8303_CB6_WBGene00031137_B
      GPL14143_CBG09576_248-307_0.724_99_C
      GPL14143_CBG09576_351-410_0.925_4_B
      GPL14143_CBG09576_360-419_0.777_68_A
  Method: Gene