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WormBase Tree Display for Gene: WBGene00031291

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Name Class

WBGene00031291SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-sel-8From_analysisInferred_from_orthology
Sequence_nameCBG09768
Molecular_nameCBG09768
CBG09768.1
CBP08326
Other_nameCBG_09768Accession_evidenceNDBHE601459
Public_nameCbr-sel-8
DB_infoDatabaseNDBlocus_tagCBG_09768
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-sel-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsel
RNASeq_FPKMWBls:000000218.3053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
36.4557From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
46.3493From_analysisRNASeq.briggsae.WBls:0000002.control_mean
84.2868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
54.8104From_analysisRNASeq.briggsae.WBls:0000002.control_mean
58.3247From_analysisRNASeq.briggsae.WBls:0000002.control_median
80.1938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003125.469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
59.9563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
92.7126From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
75.0379From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
86.8211From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000418.7353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
21.5464From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
24.3576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
21.6918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
22.0742From_analysisRNASeq.briggsae.WBls:0000004.control_mean
22.7671From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
22.8194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002710.3124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.12384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.29592From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.91072From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.4056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.30416From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.53444From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003537.2874From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.9214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
22.1462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
22.7278From_analysisRNASeq.briggsae.WBls:0000038.control_median
23.3093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
24.4065From_analysisRNASeq.briggsae.WBls:0000038.control_mean
40.249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004142.6045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
56.9692From_analysisRNASeq.briggsae.WBls:0000041.control_mean
59.1896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
59.7528From_analysisRNASeq.briggsae.WBls:0000041.control_median
60.3159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
65.7669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
46.0772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
55.0633From_analysisRNASeq.briggsae.WBls:0000041.control_mean
56.4257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
57.8077From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006322.065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
24.2448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
25.4346From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.1959From_analysisRNASeq.briggsae.WBls:0000063.control_mean
26.624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
32.6113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
26.0293From_analysisRNASeq.briggsae.WBls:0000063.control_median
29.3984From_analysisRNASeq.briggsae.WBls:0000063.control_mean
45.4108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010124.3576From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.8745From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
24.8961From_analysisRNASeq.briggsae.total_over_all_stages.control_median
35.2418From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (19)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Transcription activator LAG-3 and Transcriptional activator LAG-3. Is an ortholog of C. elegans sel-8. In C. elegans, sel-8 is involved in several processes, including Notch signaling pathway; positive regulation of stem cell proliferation; and regulation of mesodermal cell fate specification.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09768
Corresponding_CDS_historyCBG09768:bp194
Corresponding_transcriptCBG09768.1
Other_sequenceACC06693_1
Dviv_isotig31756
PPC02161_1
EX548962.1
JI481455.1
Dviv_isotig25920
Experimental_infoExpr_patternExpr1054906
Microarray_resultsGPL8303_CB6_WBGene00031291_A
GPL8303_CB6_WBGene00031291_B
GPL14143_CBG09768_382-441_0.901_21_C
GPL14143_CBG09768_604-663_0.837_81_A
GPL14143_CBG09768_680-739_0.939_2_B
MethodGene