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WormBase Tree Display for Gene: WBGene00031300

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Name Class

WBGene00031300SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-mrpl-35From_analysisInferred_from_orthology
Sequence_nameCBG09777
Molecular_nameCBG09777
CBG09777.1
CBP08371
Other_nameCBG_09777Accession_evidenceNDBHE601459
Public_nameCbr-mrpl-35
DB_infoDatabaseNDBlocus_tagCBG_09777
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
210 Jun 2011 16:53:57WBPerson2970Name_changeCGC_nameCbr-mrpl-35
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmrpl
RNASeq_FPKMWBls:000000260.7937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
66.5702From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
69.2372From_analysisRNASeq.briggsae.WBls:0000002.control_mean
80.3478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
109.488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
73.459From_analysisRNASeq.briggsae.WBls:0000002.control_median
79.2999From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000336.5179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
39.1933From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
41.8687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
26.4187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
34.9351From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000449.7198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
50.0541From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
50.3885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
46.7527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
55.0703From_analysisRNASeq.briggsae.WBls:0000004.control_mean
56.4656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
72.0249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.2765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.4124From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
30.3671From_analysisRNASeq.briggsae.WBls:0000027.control_mean
65.4124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
39.9124From_analysisRNASeq.briggsae.WBls:0000027.control_median
40.8882From_analysisRNASeq.briggsae.WBls:0000027.control_mean
72.4515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003589.2029From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038118.189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
121.922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
48.5234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
68.3991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
89.2584From_analysisRNASeq.briggsae.WBls:0000038.control_mean
93.2941From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004167.3115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
78.8501From_analysisRNASeq.briggsae.WBls:0000041.control_mean
81.246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
81.727From_analysisRNASeq.briggsae.WBls:0000041.control_median
82.208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
84.6348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
128.222From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
83.4214From_analysisRNASeq.briggsae.WBls:0000041.control_median
89.1052From_analysisRNASeq.briggsae.WBls:0000041.control_mean
91.0091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063104.1From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
62.8019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
64.2886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
70.0062From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
77.2359From_analysisRNASeq.briggsae.WBls:0000063.control_mean
84.983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
70.1356From_analysisRNASeq.briggsae.WBls:0000063.control_median
70.265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
76.0741From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010165.2211From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
66.5702From_analysisRNASeq.briggsae.total_over_all_stages.control_median
67.4871From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
67.8553From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (31)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domain: Ribosomal protein L35, mitochondrial. Is an ortholog of C. elegans mrpl-35.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09777
Corresponding_CDS_historyCBG09777:bp194
Corresponding_transcriptCBG09777.1
Other_sequence (48)
Experimental_infoExpr_patternExpr1055592
Microarray_resultsGPL8303_CB6_WBGene00031300_A
GPL14143_CBG09777_95-154_0.939_1_C
GPL14143_CBG09777_333-392_0.896_9_A
GPL14143_CBG09777_422-481_0.894_10_B
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene