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WormBase Tree Display for Gene: WBGene00031348

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Name Class

WBGene00031348SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-zmp-2From_analysisInferred_from_orthology
Sequence_nameCBG09830
Molecular_nameCBG09830
CBG09830.1
CBP16661
Other_nameCBG_09830Accession_evidenceNDBHE601459
Public_nameCbr-zmp-2
DB_infoDatabaseNDBlocus_tagCBG_09830
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
204 Jan 2016 15:57:05WBPerson2970Name_changeCGC_nameCbr-zmp-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classzmp
RNASeq_FPKMWBls:00000025.68421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.97348From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.05535From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.50836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.6723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.20959From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.82885From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.719355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.06343From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.40751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.259From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.65015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.1296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.7385From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.3473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
10.1526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
10.8745From_analysisRNASeq.briggsae.WBls:0000004.control_mean
11.2265From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
11.5167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.236058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.91207From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.18569From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.40895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.02591From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.42421From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.13975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003520.7923From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.6733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.70311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.13652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
8.27862From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.98341From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.42073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.579086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.821457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.921779From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.0221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.03186From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.70481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.10891From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.12569From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.19573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.43098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.383029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.689322From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.727869From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.801914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.5338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.633085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.67995From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.680477From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001014.95033From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.17323From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.90602From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.09583From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134864
00134865
00134866
00134867
00134868
Ortholog (31)
ParalogWBGene00023583Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028045Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028727Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030720Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032707Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035861Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041593Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042327Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular matrix. Is an ortholog of C. elegans zmp-2. In C. elegans, zmp-2 is involved in several processes, including determination of adult lifespan; regulation of metabolic process; and regulation of transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09830
Corresponding_CDS_historyCBG09830:bp194
Corresponding_transcriptCBG09830.1
Other_sequenceES741150.1
Oden_isotig18663
ES741502.1
Hbac_isotig03769
HBC20979_1
ES412226.1
HBC08229_1
HBC20714_1
JI171480.1
Experimental_infoExpr_patternExpr1059891
Microarray_resultsGPL8303_CB6_WBGene00031348_A
GPL8303_CB6_WBGene00031348_B
GPL14143_CBG09830_500-559_0.866_20_C
GPL14143_CBG09830_556-615_0.873_15_B
GPL14143_CBG09830_897-956_0.897_7_A
MethodGene