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WormBase Tree Display for Gene: WBGene00031488

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Name Class

WBGene00031488SMapS_parentSequencecb25.fpc2234
IdentityVersion3
NameSequence_nameCBG10000
Molecular_nameCBG10000
CBG10000.1
CBP10352
Other_nameCBG_10000Accession_evidenceNDBHE601459
Public_nameCBG10000
DB_infoDatabaseNDBlocus_tagCBG_10000
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
214 Aug 2012 11:59:34WBPerson2970Name_changeCGC_nameCbr-vha-2
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002583.913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
612.641From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
695.4From_analysisRNASeq.briggsae.WBls:0000002.control_mean
889.645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
501.693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
598.277From_analysisRNASeq.briggsae.WBls:0000002.control_median
646.973From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003561.419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
588.294From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
615.169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
561.779From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
579.456From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004778.16From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
781.222From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
784.284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
815.79From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
843.572From_analysisRNASeq.briggsae.WBls:0000004.control_mean
897.145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
942.483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027117.685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
272.255From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
422.425From_analysisRNASeq.briggsae.WBls:0000027.control_mean
877.334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
545.326From_analysisRNASeq.briggsae.WBls:0000027.control_mean
574.794From_analysisRNASeq.briggsae.WBls:0000027.control_median
914.032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035981.404From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038549.262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
825.732From_analysisRNASeq.briggsae.WBls:0000038.control_mean
882.866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
893.97From_analysisRNASeq.briggsae.WBls:0000038.control_median
905.074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
965.725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041387.661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
427.469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
431.15From_analysisRNASeq.briggsae.WBls:0000041.control_median
432.531From_analysisRNASeq.briggsae.WBls:0000041.control_mean
434.831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
480.162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
391.588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
432.024From_analysisRNASeq.briggsae.WBls:0000041.control_mean
470.435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631367.32From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
644.995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
659.388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
704.295From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
731.11From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
821.422From_analysisRNASeq.briggsae.WBls:0000063.control_mean
547.136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
681.841From_analysisRNASeq.briggsae.WBls:0000063.control_median
775.707From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101704.295From_analysisRNASeq.briggsae.total_over_all_stages.control_median
717.334From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
681.841From_analysisRNASeq.briggsae.total_over_all_stages.control_median
706.441From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134988
00134989
00134990
00134991
00134992
Ortholog (41)
ParalogWBGene00026180Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031489Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036658Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans vha-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10000
Corresponding_CDS_historyCBG10000:bp194
Corresponding_transcriptCBG10000.1
Other_sequence (101)
Experimental_infoExpr_patternExpr1065233
Microarray_resultsGPL8303_CB6_WBGene00031488_A
GPL8303_CB6_WBGene00031488_B
GPL14143_CBG10000_127-186_0.688_17_B
GPL14143_CBG10000_231-290_0.942_1_A
GPL14143_CBG10000_372-431_0.695_16_C
Remark[180319 gw3] The CGC name Cbr-vha-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene