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WormBase Tree Display for Gene: WBGene00031506

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Name Class

WBGene00031506SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-set-3From_analysisInferred_from_orthology
Sequence_nameCBG10020
Molecular_nameCBG10020
CBG10020.1
CBP40288
Other_nameCBG_10020Accession_evidenceNDBHE601459
Public_nameCbr-set-3
DB_infoDatabaseNDBlocus_tagCBG_10020
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-set-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classset
RNASeq_FPKMWBls:000000222.8462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
31.2217From_analysisRNASeq.briggsae.WBls:0000002.control_mean
33.0878From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
37.7312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
33.9875From_analysisRNASeq.briggsae.WBls:0000002.control_mean
35.4095From_analysisRNASeq.briggsae.WBls:0000002.control_median
42.2848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000353.3869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
63.6004From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
73.814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
64.2878From_analysisRNASeq.briggsae.WBls:0000003.control_mean
65.6626From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000447.0576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
47.1381From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
47.2187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
45.7386From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
48.0051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
48.5339From_analysisRNASeq.briggsae.WBls:0000004.control_mean
54.6496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.448646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.70444From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
20.3005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.48453From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.26568From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.82013From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.82692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003511.0745From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.9517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
14.0334From_analysisRNASeq.briggsae.WBls:0000038.control_median
16.1151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
17.7838From_analysisRNASeq.briggsae.WBls:0000038.control_mean
38.3263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.7423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004141.9162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
63.7762From_analysisRNASeq.briggsae.WBls:0000041.control_mean
69.0603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
70.3165From_analysisRNASeq.briggsae.WBls:0000041.control_median
71.5726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
72.5559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
58.3815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
65.2287From_analysisRNASeq.briggsae.WBls:0000041.control_mean
77.8854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006327.7638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
28.3413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
35.5278From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
36.6849From_analysisRNASeq.briggsae.WBls:0000063.control_mean
37.2081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
54.5833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
32.927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
34.2274From_analysisRNASeq.briggsae.WBls:0000063.control_median
36.0586From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010128.3413From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.0449From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
35.8858From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
36.368From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (27)
ParalogWBGene00025962Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035030Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038902Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042791Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: SET domain. Is an ortholog of C. elegans set-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10020
Corresponding_CDS_historyCBG10020:bp194
CBG10020:bp255
Corresponding_transcriptCBG10020.1
Other_sequenceCBC14341_1
CBC09680_1
Experimental_infoExpr_patternExpr1058363
Microarray_resultsGPL8303_CB6_WBGene00031506_A
GPL8303_CB6_WBGene00031506_B
GPL14143_CBG10020_104-163_0.860_50_B
GPL14143_CBG10020_681-740_0.844_68_C
GPL14143_CBG10020_817-876_0.907_25_A
MethodGene