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WormBase Tree Display for Gene: WBGene00031577

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Name Class

WBGene00031577SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-nlp-48From_analysisInferred_from_orthology
Sequence_nameCBG10099
Molecular_nameCBG10099a
CBG10099a.1
CBP41700
CBG10099b
CBP46033
CBG10099b.1
Other_nameCBG_10099Accession_evidenceNDBHE601459
Public_nameCbr-nlp-48
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
205 Oct 2016 14:44:33WBPerson2970Name_changeCGC_nameCbr-nlp-48
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnlp
RNASeq_FPKMWBls:00000023.19699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.51971From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.51117From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.85098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
10.5549From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.68108From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.77851From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
3.43426From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.86852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.28951From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.7932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
20.5669From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
30.3406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
15.5364From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
28.7768From_analysisRNASeq.briggsae.WBls:0000004.control_mean
7.64977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
79.5638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000271.31539From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
16.9692From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.96721From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
46.6249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
18.9677From_analysisRNASeq.briggsae.WBls:0000027.control_median
21.4689From_analysisRNASeq.briggsae.WBls:0000027.control_mean
34.9681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003516.2809From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.958974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
16.7802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.69833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.41414From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.12995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.14186From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000410.264031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.76471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.14862From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.53253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.45363From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.25326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
13.725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.8929From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.18641From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.57894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006312.3745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.53637From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.53811From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.77967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.927083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.23173From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.10294From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010110.0028From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.12995From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.1733From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.85975From_analysisRNASeq.briggsae.total_over_all_stages.control_median
OrthologWBGene00008002Caenorhabditis elegansFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00175585Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CSP26.g5713Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP29.g3290Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP38.g3298Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2294Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cni-C38C10.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09151Oscheius tipulaeFrom_analysisWormBase-Compara
chrIII_pilon.g8604Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00035553Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans nlp-48.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10099a
CBG10099b
Corresponding_CDS_historyCBG10099:bp167
CBG10099:bp255
Corresponding_transcriptCBG10099a.1
CBG10099b.1
Other_sequenceOOC03519_1
NB07451
AE02436
NBC02373_1
CJC17006_1
AYC00730_1
Experimental_infoExpr_patternExpr1068539
Microarray_resultsGPL8303_CB6_WBGene00031577_A
GPL8303_CB6_WBGene00031577_B
GPL14143_CBG10099_137-196_0.919_1_A
MethodGene