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WormBase Tree Display for Gene: WBGene00031616

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Name Class

WBGene00031616SMapS_parentSequencecb25.fpc2234
IdentityVersion1
NameSequence_nameCBG10153
Molecular_nameCBG10153
CBG10153.1
CBP08406
Other_nameCBG_10153Accession_evidenceNDBHE601459
Public_nameCBG10153
DB_infoDatabaseNDBlocus_tagCBG_10153
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00043947
WBVar00035229
WBVar00007244
WBVar00137156
WBVar00115596
WBVar00137157
RNASeq_FPKMWBls:00000020.397963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.502896From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.535605From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.705956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.469659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.486277From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.519118From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000032.23411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.31769From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.40128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.22691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.9541From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000047.44967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
7.46058From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.47149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
8.42992From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.62178From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.13815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
9.46851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.37519From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.12557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.421792From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.492289From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.843584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.60159From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.726521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.30353From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.40007From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.4095From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.41893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.6686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.428512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.504572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.592595From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.680618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.793356From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.55972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.653113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.666866From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.904821From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.60239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.168798From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.401347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.442642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.200674From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.257637From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.701834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.726521From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.38493From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.984577From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.91813From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00135142
Contained_in_operonCBOPA0333
Ortholog (22)
ParalogWBGene00025954Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027062Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029718Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037132Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in protein homooligomerization. Is an ortholog of C. elegans T23G5.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10153
Corresponding_CDS_historyCBG10153:bp194
CBG10153:bp255
Corresponding_transcriptCBG10153.1
Other_sequence (15)
Experimental_infoExpr_patternExpr1064287
Microarray_resultsGPL8303_CB6_WBGene00031616_A
GPL8303_CB6_WBGene00031616_B
GPL14143_CBG10153_323-382_0.934_6_C
GPL14143_CBG10153_451-510_0.958_2_B
GPL14143_CBG10153_601-660_0.963_1_A
MethodGene