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WormBase Tree Display for Gene: WBGene00031733

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Name Class

WBGene00031733SMapS_parentSequencecb25.fpc2260b
IdentityVersion4
NameCGC_nameCbr-nspe-6From_analysisInferred_from_orthology
Sequence_nameCBG10325
Molecular_nameCBG10325
CBG10325.1
CBP08455
Other_nameCBG_10325Accession_evidenceNDBHE600918
Public_nameCbr-nspe-6
DB_infoDatabaseNDBlocus_tagCBG_10325
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
208 May 2019 10:09:22WBPerson1983Name_changeCGC_nameCbr-nspe-6
301 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameRemoved
404 Jun 2020 14:38:21WBPerson1983Name_changeCGC_nameCbr-nspe-6
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbr-nspe-7.3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnspe
RNASeq_FPKMWBls:000000212.5418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.22911From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.92364From_analysisRNASeq.briggsae.WBls:0000002.control_mean
11.8841From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.7655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.38546From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.75171From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.50342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.50114From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000411.3623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.8198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.09105From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
12.5629From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.28014From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
6.80503From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:000002417.1385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
29.1476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
34.8229From_analysisRNASeq.briggsae.WBls:0000024.control_mean
36.4565From_analysisRNASeq.briggsae.WBls:0000024.control_median
43.7653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
59.1894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
7.18948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
33.3641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
WBls:000002714.8327From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.3359From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
31.175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
12.1831From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.72487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.77878From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000353.42353From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
20.2045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.36861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.44406From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.51951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.77316From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004110.9523From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.9761From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
15.9501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.90698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.94311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.8889From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.0378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.48624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006312.1168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
13.6197From_analysisRNASeq.briggsae.WBls:0000063.control_mean
14.6174From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.7837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
23.5805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
11.3497From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.3671From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010112.5579From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.94311From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.5536From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.3545From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Contained_in_operonCBOPA0340
Ortholog (49)
ParalogWBGene00031726Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00031727Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00031729Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031730Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031731Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031732Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042849Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042850Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042851Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042852Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412. Is an ortholog of C. elegans nspe-5; nspe-6; and nspe-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10325
Corresponding_CDS_historyCBG10325:bp194
Corresponding_transcriptCBG10325.1
Experimental_infoExpr_patternExpr1068076
Microarray_resultsGPL8303_CB6_WBGene00031733_A
GPL8303_CB6_WBGene00031733_B
GPL14143_CBG10325_90-149_0.798_1_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
Remark[191001 pad] The CGC name Cbr-nspe-6 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cbr-nspe-6 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene