WormBase Tree Display for Gene: WBGene00032258

WBGene00032258 SMap: S_parent: Sequence: cb25.fpc2441
  Identity: Version: 3
    Name: CGC_name: Cbr-atgp-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG11071
      Molecular_name: CBG11071
        CBG11071.1
        CBP38846
      Other_name: Cbr-atg-2 From_analysis: Inferred_from_orthology
        CBG_11071 Accession_evidence: NDB HE601351
      Public_name: Cbr-atgp-2
    DB_info: Database: NDB locus_tag CBG_11071
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:01 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-atg-2
        3 29 Feb 2008 11:51:57 WBPerson2970 Name_change: CGC_name: Cbr-atgp-2
                Other_name: Cbr-atg-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atgp
    RNASeq_FPKM: WBls:0000002 20.8899 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        27.1663 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        28.4013 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        37.1478 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        12.8511 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        24.0281 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        24.5138 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.553013 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        2.62827 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        4.70353 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        3.95441 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        6.60668 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 25.6107 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        26.1806 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        26.7505 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        24.7252 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        26.9385 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        27.1081 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        30.4978 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 15.7074 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.77591 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        35.994 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        8.35223 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        22.1731 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        22.8723 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        44.3672 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 66.9862 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 36.0106 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        38.2307 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        40.5331 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        42.8356 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        53.199 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        9.77727 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 11.0878 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        6.08681 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        7.9147 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        8.46488 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        8.5261 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        9.01507 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        10.0108 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        10.0514 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        11.8071 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        14.1536 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 6.16247 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        6.64217 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        7.13699 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        7.45826 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        8.27298 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        9.07671 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        18.1517 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        7.70499 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        9.2405 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 11.0878 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        24.61 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        16.1527 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        23.7884 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00135691
    Ortholog (30)
    Paralog: WBGene00023839 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028973 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037508 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans atgp-2. In C. elegans, atgp-2 is involved in amino acid transmembrane transport. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG11071
    Corresponding_CDS_history: CBG11071:bp194
      CBG11071:bp255
    Corresponding_transcript: CBG11071.1
    Other_sequence (58)
  Experimental_info: Expr_pattern: Expr1053930
    Microarray_results: GPL8303_CB6_WBGene00032258_A
      GPL8303_CB6_WBGene00032258_B
      GPL14143_CBG11071_1441-1500_0.914_15_C
      GPL14143_CBG11071_1615-1674_0.924_9_A
      GPL14143_CBG11071_1832-1891_0.947_1_B
  Method: Gene