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WormBase Tree Display for Gene: WBGene00032280

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Name Class

WBGene00032280SMapS_parentSequencecb25.fpc2441
IdentityVersion2
NameCGC_nameCbr-mes-2From_analysisInferred_from_orthology
Sequence_nameCBG11099
Molecular_nameCBG11099
CBG11099.1
CBP48105
Other_nameCBG_11099Accession_evidenceNDBHE601351
Public_nameCbr-mes-2
DB_infoDatabaseNDBlocus_tagCBG_11099
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-mes-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmes
RNASeq_FPKMWBls:000000214.4362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
22.7173From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.7215From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
27.9941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.3944From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.8578From_analysisRNASeq.briggsae.WBls:0000002.control_median
29.4257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003144.138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
148.88From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
153.621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
156.55From_analysisRNASeq.briggsae.WBls:0000003.control_mean
171.891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000458.2401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
60.9174From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
63.5946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
57.3228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
58.1417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
59.6705From_analysisRNASeq.briggsae.WBls:0000004.control_mean
61.0532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.18023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.15642From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.38901From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.83037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.34818From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.92674From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.53994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000356.46181From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.48822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
4.82608From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.34997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.78678From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.22359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.24255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004110.0719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
48.4687From_analysisRNASeq.briggsae.WBls:0000041.control_mean
59.6863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
60.1964From_analysisRNASeq.briggsae.WBls:0000041.control_median
60.7066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
63.4098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
12.9294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
16.7794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
37.2639From_analysisRNASeq.briggsae.WBls:0000041.control_mean
38.2328From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006313.4235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
14.0888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
14.3872From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
16.829From_analysisRNASeq.briggsae.WBls:0000063.control_mean
18.4051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
23.8404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
16.3962From_analysisRNASeq.briggsae.WBls:0000063.control_median
17.8449From_analysisRNASeq.briggsae.WBls:0000063.control_mean
22.9242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010113.4235From_analysisRNASeq.briggsae.total_over_all_stages.control_median
28.933From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
14.4117From_analysisRNASeq.briggsae.total_over_all_stages.control_median
33.5807From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Contained_in_operonCBOPA0858
Ortholog (50)
Paralog (35)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: CXC domain; Pre-SET CXC domain; and SET domain. Is an ortholog of C. elegans mes-2. In C. elegans, mes-2 is involved in epigenetic regulation of gene expression; germ-line stem cell division; and tissue development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11099
Corresponding_CDS_historyCBG11099:bp194
CBG11099:bp258
Corresponding_transcriptCBG11099.1
Other_sequenceAcan_isotig08183
FC554950.1
CR00887
JI168271.1
Experimental_infoExpr_patternExpr1050414
Microarray_resultsGPL8303_CB6_WBGene00032280_A
GPL8303_CB6_WBGene00032280_B
GPL14143_CBG11099_1102-1161_0.787_116_C
GPL14143_CBG11099_1309-1368_0.478_481_A
GPL14143_CBG11099_2717-2776_0.952_1_B
WBProcessWBbiopr:00000135
MethodGene