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WormBase Tree Display for Gene: WBGene00032487

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Name Class

WBGene00032487SMapS_parentSequencecb25.fpc2454b
IdentityVersion2
NameCGC_nameCbr-myo-5From_analysisInferred_from_orthology
Sequence_nameCBG11357
Molecular_nameCBG11357
CBG11357.1
CBP42647
Other_nameCBG_11357Accession_evidenceNDBHE600908
Public_nameCbr-myo-5
DB_infoDatabaseNDBlocus_tagCBG_11357
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-myo-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmyo
RNASeq_FPKMWBls:00000020.698785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
18.934From_analysisRNASeq.briggsae.WBls:0000002.control_mean
22.6247From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
33.4785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.5048From_analysisRNASeq.briggsae.WBls:0000002.control_median
14.7967From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.38487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.095817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.05732From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.01882From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.43867From_analysisRNASeq.briggsae.WBls:0000003.control_mean
3.20136From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.6823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
11.1279From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.5735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
10.3284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
10.9532From_analysisRNASeq.briggsae.WBls:0000004.control_mean
10.978From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
11.2036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002711.6774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.1858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
7.75981From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.41622From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
10.0468From_analysisRNASeq.briggsae.WBls:0000027.control_median
23.0096From_analysisRNASeq.briggsae.WBls:0000027.control_mean
68.7589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003523.3064From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.90031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
19.7738From_analysisRNASeq.briggsae.WBls:0000038.control_median
23.1871From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.20417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
36.3435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
51.3004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.3072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.93563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.8224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.33442From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.54743From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.27247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.59027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.02019From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.19099From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.21798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.26104From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.71672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.17675From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.70135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.71036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
10.339From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.27403From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.43905From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010114.5542From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.8224From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.6072From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.3171From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00135899
00135900
00135901
00135902
Ortholog (40)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans myo-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11357
Corresponding_CDS_historyCBG11357:bp194
CBG11357:bp255
Corresponding_transcriptCBG11357.1
Other_sequence (36)
Experimental_infoExpr_patternExpr1058147
Microarray_resultsGPL8303_CB6_WBGene00032487_A
GPL14143_CBG11357_4634-4693_0.844_75_B
GPL14143_CBG11357_4795-4854_0.732_494_A
GPL14143_CBG11357_5748-5807_0.941_1_C
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_upregulated
WBPaper00051425:CB_L4_vs_embryo_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene