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WormBase Tree Display for Gene: WBGene00032594

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Name Class

WBGene00032594SMapS_parentSequencecb25.fpc2454b
IdentityVersion1
NameSequence_nameCBG11484
Molecular_nameCBG11484
CBG11484.1
CBP02772
Other_nameCBG_11484Accession_evidenceNDBHE600908
Public_nameCBG11484
DB_infoDatabaseNDBlocus_tagCBG_11484
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002110.291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
50.1444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
58.6334From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
73.0229From_analysisRNASeq.briggsae.WBls:0000002.control_mean
57.8277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
58.2305From_analysisRNASeq.briggsae.WBls:0000002.control_median
69.2241From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000339.0776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
50.3102From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
61.5428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
37.3973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
46.0059From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000441.0078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
44.3686From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
47.7295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
34.975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
44.8414From_analysisRNASeq.briggsae.WBls:0000004.control_mean
45.2036From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
55.2913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.5491From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
20.4864From_analysisRNASeq.briggsae.WBls:0000027.control_mean
43.4589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.45119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
28.004From_analysisRNASeq.briggsae.WBls:0000027.control_median
35.2964From_analysisRNASeq.briggsae.WBls:0000027.control_mean
79.7264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003567.5664From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038114.503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
53.8295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
60.0527From_analysisRNASeq.briggsae.WBls:0000038.control_median
60.9656From_analysisRNASeq.briggsae.WBls:0000038.control_mean
66.2759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.25402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004127.9796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
34.216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
34.9252From_analysisRNASeq.briggsae.WBls:0000041.control_median
35.6343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
37.4223From_analysisRNASeq.briggsae.WBls:0000041.control_mean
51.8592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
40.3574From_analysisRNASeq.briggsae.WBls:0000041.control_median
45.0805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
47.9066From_analysisRNASeq.briggsae.WBls:0000041.control_mean
92.6701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006318.5612From_analysisRNASeq.briggsae.WBls:0000063.control_mean
19.1687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
22.1692From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
24.9492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
26.5191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
23.5592From_analysisRNASeq.briggsae.WBls:0000063.control_median
25.0074From_analysisRNASeq.briggsae.WBls:0000063.control_mean
57.2384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010143.4589From_analysisRNASeq.briggsae.total_over_all_stages.control_median
45.7079From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
46.4665From_analysisRNASeq.briggsae.total_over_all_stages.control_median
48.1826From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (32)
ParalogWBGene00023945Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; Enoyl-(Acyl carrier protein) reductase; and NAD(P)-binding domain superfamily. Is an ortholog of C. elegans F53C11.3. In C. elegans, F53C11.3 is involved in defense response to Gram-negative bacterium and innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11484
Corresponding_CDS_historyCBG11484:bp194
CBG11484:bp195
CBG11484:bp255
Corresponding_transcriptCBG11484.1
Other_sequence (58)
Experimental_infoExpr_patternExpr1064746
Microarray_resultsGPL8303_CB6_WBGene00032594_A
GPL14143_CBG11484_546-605_0.938_5_B
GPL14143_CBG11484_882-941_0.967_1_A
GPL14143_CBG11484_890-949_0.966_2_C
MethodGene